RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 OR10AG1Q8NH19 301 aa18.22■□□□□ 0.51
CDK9-201ENST00000373264 TMEM191AQ9H0A3 160 aa18.22■□□□□ 0.51
CDK9-201ENST00000373264 U3KQE9 123 aa18.22■□□□□ 0.51
CDK9-201ENST00000373264 PET117Q6UWS5 81 aa18.22■□□□□ 0.51
CDK9-201ENST00000373264 SLC50A1Q9BRV3 221 aa18.22■□□□□ 0.51
CDK9-201ENST00000373264 C20orf202A1L168 122 aa18.21■□□□□ 0.51
CDK9-201ENST00000373264 MRPS16Q9Y3D3 137 aaKnown RBP18.21■□□□□ 0.51
CDK9-201ENST00000373264 DLEU1O43261 78 aa18.21■□□□□ 0.5
CDK9-201ENST00000373264 EVI2AP22794 236 aa18.21■□□□□ 0.5
CDK9-201ENST00000373264 RAB9AP51151 201 aa18.21■□□□□ 0.5
CDK9-201ENST00000373264 PRR9Q5T870 116 aa18.21■□□□□ 0.5
CDK9-201ENST00000373264 LINC01545Q5VT33 79 aa18.21■□□□□ 0.5
CDK9-201ENST00000373264 SPRY2O43597 315 aa18.2■□□□□ 0.5
CDK9-201ENST00000373264 RPS20P60866 119 aaKnown RBP18.2■□□□□ 0.5
CDK9-201ENST00000373264 IGKV3-7A0A075B6H7 116 aa18.19■□□□□ 0.5
CDK9-201ENST00000373264 FBLL1A6NHQ2 334 aaKnown RBP18.19■□□□□ 0.5
CDK9-201ENST00000373264 SNAI2O43623 268 aa18.19■□□□□ 0.5
CDK9-201ENST00000373264 LINC01559Q495D7 138 aa18.19■□□□□ 0.5
CDK9-201ENST00000373264 S100A7P31151 101 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 GPHB5Q86YW7 130 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 C16orf92Q96LL3 132 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 ST20Q9HBF5 79 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 FAM208BQ5VWN6 2430 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 CLEC2AQ6UVW9 174 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 GLMPQ8WWB7 406 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 MEGF9Q9H1U4 602 aa18.18■□□□□ 0.5
CDK9-201ENST00000373264 RBAKDNA6NC62 111 aa18.17■□□□□ 0.5
CDK9-201ENST00000373264 EDN2P20800 178 aa18.17■□□□□ 0.5
CDK9-201ENST00000373264 TMEM78Q5T7P6 136 aa18.17■□□□□ 0.5
CDK9-201ENST00000373264 TMEM95Q3KNT9 176 aa18.17■□□□□ 0.5
CDK9-201ENST00000373264 MPV17L2Q567V2 206 aa18.16■□□□□ 0.5
CDK9-201ENST00000373264 SCRT2Q9NQ03 307 aa18.16■□□□□ 0.5
CDK9-201ENST00000373264 FAM223BA6NKX1 122 aa18.16■□□□□ 0.5
CDK9-201ENST00000373264 FAM223AQ8IWN6 122 aa18.16■□□□□ 0.5
CDK9-201ENST00000373264 PF4V1P10720 104 aa18.15■□□□□ 0.5
CDK9-201ENST00000373264 CNFNQ9BYD5 112 aa18.15■□□□□ 0.5
CDK9-201ENST00000373264 DOPEY2Q9Y3R5 2298 aa18.15■□□□□ 0.5
CDK9-201ENST00000373264 ERASQ7Z444 233 aa18.14■□□□□ 0.5
CDK9-201ENST00000373264 HIF1ANQ9NWT6 349 aa18.14■□□□□ 0.5
CDK9-201ENST00000373264 TRAV26-2A0A0B4J265 109 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 A6NDX4 124 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 HSBP1L1C9JCN9 74 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 MSMBP08118 114 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 ZNF124Q15973 351 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 C18orf15Q96N68 181 aa18.14■□□□□ 0.49
CDK9-201ENST00000373264 IGHV7-4-1A0A0J9YVY3 117 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 F6UB75 175 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 CRIP2P52943 208 aaPredicted RBP18.13■□□□□ 0.49
CDK9-201ENST00000373264 CACNG7P62955 275 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 SRSF2Q01130 221 aaKnown RBP18.13■□□□□ 0.49
CDK9-201ENST00000373264 ZNF738Q8NE65 137 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 GOLT1BQ9Y3E0 138 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 ANKRD17O75179 2603 aaKnown RBP18.13■□□□□ 0.49
CDK9-201ENST00000373264 LRRK2Q5S007 2527 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 SLC25A34Q6PIV7 304 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 MAPK1IP1LQ8NDC0 245 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 ZNF462Q96JM2 2506 aa18.13■□□□□ 0.49
CDK9-201ENST00000373264 IGHG2P01859 326 aa18.12■□□□□ 0.49
CDK9-201ENST00000373264 SRD5A1P18405 259 aa18.12■□□□□ 0.49
CDK9-201ENST00000373264 RPL11P62913 178 aaKnown RBP18.12■□□□□ 0.49
CDK9-201ENST00000373264 KIR3DS1Q14943 382 aa18.12■□□□□ 0.49
CDK9-201ENST00000373264 DMRTA1Q5VZB9 504 aa18.12■□□□□ 0.49
CDK9-201ENST00000373264 C9orf47Q6ZRZ4 202 aa18.12■□□□□ 0.49
CDK9-201ENST00000373264 TCF21O43680 179 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 PRB1P04280 392 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 ANKRD39Q53RE8 183 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 TNFRSF6BO95407 300 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 NUDT3O95989 172 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 HBDP02042 147 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 TM4SF20Q53R12 229 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 OR4X2Q8NGF9 303 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 USP24Q9UPU5 2620 aa18.11■□□□□ 0.49
CDK9-201ENST00000373264 MXRA5Q9NR99 2828 aa18.1■□□□□ 0.49
CDK9-201ENST00000373264 HIST1H1AQ02539 215 aaPredicted RBP18.1■□□□□ 0.49
CDK9-201ENST00000373264 C10orf99Q6UWK7 81 aa18.1■□□□□ 0.49
CDK9-201ENST00000373264 UFC1Q9Y3C8 167 aa18.09■□□□□ 0.49
CDK9-201ENST00000373264 H3BVH4 76 aa18.09■□□□□ 0.49
CDK9-201ENST00000373264 SPOCK3Q9BQ16 436 aa18.09■□□□□ 0.49
CDK9-201ENST00000373264 NDUFS8O00217 210 aa18.08■□□□□ 0.48
CDK9-201ENST00000373264 SOCS3O14543 225 aa18.08■□□□□ 0.48
CDK9-201ENST00000373264 NDUFA4O00483 81 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 IFI27L1Q96BM0 104 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 MRPL53Q96EL3 112 aaKnown RBP18.07■□□□□ 0.48
CDK9-201ENST00000373264 MAP1LC3AQ9H492 121 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 DKK2Q9UBU2 259 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 LEPP41159 167 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 GAGE1Q13065 139 aa18.07■□□□□ 0.48
CDK9-201ENST00000373264 C9orf139Q6ZV77 190 aa18.06■□□□□ 0.48
CDK9-201ENST00000373264 ZFAND2AQ8N6M9 145 aa18.06■□□□□ 0.48
CDK9-201ENST00000373264 ABCA12Q86UK0 2595 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 C2orf91Q6ZV80 131 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 NPFFR1Q9GZQ6 430 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 IGHV4-59P01825 116 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 BVES-AS1Q5T3Y7 98 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 MS4A6AQ9H2W1 248 aa18.05■□□□□ 0.48
CDK9-201ENST00000373264 PTPN13Q12923 2485 aa18.04■□□□□ 0.48
CDK9-201ENST00000373264 WFDC12Q8WWY7 111 aa18.04■□□□□ 0.48
CDK9-201ENST00000373264 SPANXN1Q5VSR9 72 aa18.04■□□□□ 0.48
CDK9-201ENST00000373264 RHPN1-AS1Q9BWJ2 59 aa18.04■□□□□ 0.48
CDK9-201ENST00000373264 COX8AP10176 69 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms