RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 C8orf88P0DMB2 117 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 IGHV3-43DP0DP04 118 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 EDDM3AQ14507 147 aa6.94□□□□□ -1.3
ATG4A-203ENST00000372232 CADP27708 2225 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 DEFB108AA8MXU0 73 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 PRYO14603 147 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 IGLC6P0CF74 106 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 EMP1P54849 157 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 HERVK_113P63121 156 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 HES1Q14469 280 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 LINC00322Q6ZN03 302 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-203ENST00000372232 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 C15orf53Q8NAA6 179 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 FAM57AQ8TBR7 257 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 ANKRD11Q6UB99 2663 aaPredicted RBP6.93□□□□□ -1.3
ATG4A-203ENST00000372232 IGLV3-9A0A075B6K5 115 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 LINC00473A8K010 186 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 LHBP01229 141 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 IGKCP01834 107 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 MAPKAPK5-AS1Q8N8E1 139 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 CHCHD5Q9BSY4 110 aa6.93□□□□□ -1.3
ATG4A-203ENST00000372232 HEATR1Q9H583 2144 aaKnown RBP6.93□□□□□ -1.3
ATG4A-203ENST00000372232 ATMQ13315 3056 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 USF3Q68DE3 2245 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 TANC2Q9HCD6 1990 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 IGHV3OR15-7A0A075B7D8 119 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 SPRY3O43610 288 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 DUTP33316 252 aaKnown RBP6.92□□□□□ -1.3
ATG4A-203ENST00000372232 LINC00205P59089 165 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 FAM27E3Q08E93 113 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 ZNF493Q6ZR52 646 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 PDPNQ86YL7 162 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 ZNRF1Q8ND25 227 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 ITLN1Q8WWA0 313 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 EDA2RQ9HAV5 297 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 U3KQK5 164 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 DMXL2Q8TDJ6 3036 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 TMSB15BA0A087X1C1 80 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 OOSP1A8MZH6 123 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 PROP1O75360 226 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 TCL1BO95988 128 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 NPYP01303 97 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 UBE2L3P68036 154 aaKnown RBP6.92□□□□□ -1.3
ATG4A-203ENST00000372232 SLC25A48Q6ZT89 311 aaKnown RBP6.92□□□□□ -1.3
ATG4A-203ENST00000372232 GTSCR1Q86UQ5 136 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 TRGV9Q99603 122 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 GNG12Q9UBI6 72 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 EPDR1Q9UM22 224 aa6.92□□□□□ -1.3
ATG4A-203ENST00000372232 SMG1Q96Q15 3661 aaKnown RBP6.91□□□□□ -1.3
ATG4A-203ENST00000372232 LOC107984156A0A0G2JMH3 177 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 TRBV7-7A0A0K0K1E9 115 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 A0A1B0GUT8 65 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 UBE2D1P51668 147 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 RIGQ13278 110 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 ARL17AQ8IVW1 177 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 OR11H6Q8NGC7 330 aa6.91□□□□□ -1.3
ATG4A-203ENST00000372232 TRAV8-1A0A0A6YYK1 113 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 TRGV8A0A0C4DH27 118 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 FCER1GP30273 86 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 MYCNOSP40205 109 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 LINC01600Q96MT4 127 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 DUX3Q96PT4 197 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 CHD8Q9HCK8 2581 aa6.9□□□□□ -1.3
ATG4A-203ENST00000372232 UQCRQO14949 82 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 DPM2O94777 84 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 ORM1P02763 201 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 FAM201AQ5SY85 155 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 TEX36Q5VZQ5 186 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 LINC00526Q96FQ7 95 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 SPANXDQ9BXN6 97 aa6.9□□□□□ -1.31
ATG4A-203ENST00000372232 TRAV8-4A0A0B4J246 113 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 H3BVH4 76 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 IGHV1-46P01743 117 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 CGB3P0DN86 165 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 CGB7P0DN87 165 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 HSPE1P61604 102 aaKnown RBP6.89□□□□□ -1.31
ATG4A-203ENST00000372232 SUMO2P61956 95 aaKnown RBP6.89□□□□□ -1.31
ATG4A-203ENST00000372232 TWIST1Q15672 202 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 C10orf126Q8N4M7 172 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 OR4C13Q8NGP0 309 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 CALYQ9NYX4 217 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 RNF7Q9UBF6 113 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 TRAV2A0A0B4J234 112 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 LOC389332A0A1B0GUA5 103 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 SLC25A20O43772 301 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 FCGR3BO75015 233 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 CRYGDP07320 174 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 RPL13AP40429 203 aaKnown RBP6.89□□□□□ -1.31
ATG4A-203ENST00000372232 UTF1Q5T230 341 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 NUP37Q8NFH4 326 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 APC2O95996 2303 aa6.89□□□□□ -1.31
ATG4A-203ENST00000372232 DIDO1Q9BTC0 2240 aaKnown RBP6.89□□□□□ -1.31
ATG4A-203ENST00000372232 PLCE1Q9P212 2302 aa6.88□□□□□ -1.31
ATG4A-203ENST00000372232 PIEZO2Q9H5I5 2752 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms