RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 Q6YL49 198 aa10.77□□□□□ -0.68
LDB3-204ENST00000372066 RCHY1Q96PM5 261 aa10.77□□□□□ -0.68
LDB3-204ENST00000372066 SH2D1AO60880 128 aa10.77□□□□□ -0.69
LDB3-204ENST00000372066 HSBP1O75506 76 aa10.77□□□□□ -0.69
LDB3-204ENST00000372066 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
LDB3-204ENST00000372066 CHCHD1Q96BP2 118 aaKnown RBP10.77□□□□□ -0.69
LDB3-204ENST00000372066 NDUFAF3Q9BU61 184 aa10.77□□□□□ -0.69
LDB3-204ENST00000372066 SSBP4Q9BWG4 385 aaPredicted RBP10.77□□□□□ -0.69
LDB3-204ENST00000372066 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
LDB3-204ENST00000372066 KIR2DL5BA0A0G2JN68 375 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 KIR2DL5BA0A0G2JPC4 375 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 KIR2DL5AQ8N109 375 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 WFDC12Q8WWY7 111 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 PPP1R14DQ9NXH3 145 aa10.76□□□□□ -0.69
LDB3-204ENST00000372066 ZNF705FA8MVS1 300 aaPredicted RBP10.75□□□□□ -0.69
LDB3-204ENST00000372066 ZNF705DP0CH99 300 aaPredicted RBP10.75□□□□□ -0.69
LDB3-204ENST00000372066 ZNF705BP0CI00 300 aaPredicted RBP10.75□□□□□ -0.69
LDB3-204ENST00000372066 PMCHP20382 165 aa10.75□□□□□ -0.69
LDB3-204ENST00000372066 ZNF493Q6ZR52 646 aa10.75□□□□□ -0.69
LDB3-204ENST00000372066 TMEM86BQ8N661 226 aa10.75□□□□□ -0.69
LDB3-204ENST00000372066 GLMPQ8WWB7 406 aa10.75□□□□□ -0.69
LDB3-204ENST00000372066 IGHV3OR16-8A0A075B7F1 116 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 NDUFA7O95182 113 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 ARMS2P0C7Q2 107 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 CTRLP40313 264 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 CFHR3Q02985 330 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 ASCL2Q99929 193 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 VGLL1Q99990 258 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 PRO1933Q9H354 126 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 LENEPQ9Y5L5 61 aa10.74□□□□□ -0.69
LDB3-204ENST00000372066 FABP5P3A8MUU1 101 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 M0QZ24 198 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 PF4V1P10720 104 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 CITED1Q99966 193 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 LINC00527Q9UJ94 153 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 HLA-DMBP28068 263 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 HIST1H1AQ02539 215 aaPredicted RBP10.73□□□□□ -0.69
LDB3-204ENST00000372066 LINC01559Q495D7 138 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 RNASEKQ6P5S7 137 aaKnown RBP10.73□□□□□ -0.69
LDB3-204ENST00000372066 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 NIT1Q86X76 327 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
LDB3-204ENST00000372066 TGP01266 2768 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 TRAV8-2A0A0B4J237 113 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 ZNF138P52744 262 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 KRTAP10-3P60369 221 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 KRTDAPP60985 99 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 Q8TAT8 98 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 NPFFR1Q9GZQ6 430 aa10.72□□□□□ -0.69
LDB3-204ENST00000372066 M0R2Z0 102 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 OR5AL1P0C617 328 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 IGLC6P0CF74 106 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 NTF3P20783 257 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 BLCAPP62952 87 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 LYZL1Q6UWQ5 148 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 FER1L6-AS1Q8NA97 138 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 LINC01006Q8NI28 216 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 VAMP8Q9BV40 100 aa10.71□□□□□ -0.69
LDB3-204ENST00000372066 IGHV3-66A0A0C4DH42 116 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 K7EMT4 169 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 ZNF207O43670 478 aaKnown RBP10.7□□□□□ -0.7
LDB3-204ENST00000372066 IGHV4-59P01825 116 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 IGFL4Q6B9Z1 124 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 C16orf92Q96LL3 132 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 CNFNQ9BYD5 112 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 CMYA5Q8N3K9 4069 aa10.7□□□□□ -0.7
LDB3-204ENST00000372066 OVOL1O14753 267 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
LDB3-204ENST00000372066 PMCHL1Q16048 86 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 RNF182Q8N6D2 247 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 PRAC2D3DTV9 90 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 LINC00614P0C842 121 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 ERCC8Q13216 396 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 FAM19A2Q8N3H0 131 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 Q8N976 141 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 TPPP3Q9BW30 176 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 AGPAT4-IT1Q9H0P7 198 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 PEF1Q9UBV8 284 aaKnown RBP10.69□□□□□ -0.7
LDB3-204ENST00000372066 U3KQK5 164 aa10.69□□□□□ -0.7
LDB3-204ENST00000372066 VWFP04275 2813 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 IGHV3OR16-13A0A075B7E8 117 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 IGHV3-49A0A0A0MS15 119 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 IGHV3-74A0A0B4J1X5 117 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 IGHV7-4-1A0A0J9YVY3 117 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 TRBV12-3P01733 135 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 BTF3P20290 206 aaKnown RBP10.68□□□□□ -0.7
LDB3-204ENST00000372066 PSMB8P28062 276 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 PROK1P58294 105 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 FAM106AQ4KMX7 169 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 FAM104BQ5XKR9 115 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 UNQ9165/PRO28630Q6UXU0 137 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 URB1-AS1Q96HZ7 61 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms