RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 MSRB1Q9NZV6 116 aa15.72■□□□□ 0.11
VEGFA-204ENST00000372064 LOXL1Q08397 574 aaPredicted RBP15.71■□□□□ 0.11
VEGFA-204ENST00000372064 LCNL1Q6ZST4 164 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 C9orf139Q6ZV77 190 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 C11orf21Q9P2W6 132 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 LOC389332A0A1B0GUA5 103 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 SMAD7O15105 426 aaKnown RBP15.71■□□□□ 0.11
VEGFA-204ENST00000372064 PF4V1P10720 104 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 CKS2P33552 79 aa15.71■□□□□ 0.11
VEGFA-204ENST00000372064 TIMM8BQ9Y5J9 83 aaPredicted RBP15.71■□□□□ 0.11
VEGFA-204ENST00000372064 USP24Q9UPU5 2620 aa15.71■□□□□ 0.1
VEGFA-204ENST00000372064 CSMD2Q7Z408 3487 aa15.71■□□□□ 0.1
VEGFA-204ENST00000372064 C16orf92Q96LL3 132 aa15.71■□□□□ 0.1
VEGFA-204ENST00000372064 hDV102S1A0JD36 115 aa15.7■□□□□ 0.1
VEGFA-204ENST00000372064 NPYP01303 97 aa15.7■□□□□ 0.1
VEGFA-204ENST00000372064 FAM208BQ5VWN6 2430 aa15.7■□□□□ 0.1
VEGFA-204ENST00000372064 GPHB5Q86YW7 130 aa15.7■□□□□ 0.1
VEGFA-204ENST00000372064 SMKR1H3BMG3 65 aa15.69■□□□□ 0.1
VEGFA-204ENST00000372064 C20orf173Q96LM9 149 aa15.69■□□□□ 0.1
VEGFA-204ENST00000372064 ZNF462Q96JM2 2506 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 IGLV1-40P01703 118 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 PPBPP02775 128 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 DSCR9P59020 149 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 SOCS3O14543 225 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 BBC3Q96PG8 261 aaPredicted RBP15.68■□□□□ 0.1
VEGFA-204ENST00000372064 MCRIP2Q9BUT9 160 aaKnown RBP15.68■□□□□ 0.1
VEGFA-204ENST00000372064 LENEPQ9Y5L5 61 aa15.68■□□□□ 0.1
VEGFA-204ENST00000372064 STPG4Q8N801 248 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 USP9YO00507 2555 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-204ENST00000372064 GATA3P23771 443 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 CFHR3Q02985 330 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 OR4X2Q8NGF9 303 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 LINC01546A6NGU7 62 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 NCR2O95944 276 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 ZNF25P17030 456 aaPredicted RBP15.67■□□□□ 0.1
VEGFA-204ENST00000372064 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
VEGFA-204ENST00000372064 IGHV7-4-1A0A0J9YVY3 117 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 HSBP1L1C9JCN9 74 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 H0Y8G0 127 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 TCF21O43680 179 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 NPFFR1Q9GZQ6 430 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 MS4A6AQ9H2W1 248 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 Q6ZQT7 251 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 SCRT2Q9NQ03 307 aa15.66■□□□□ 0.1
VEGFA-204ENST00000372064 G0S2P27469 103 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 ZNF580Q9UK33 172 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 POLQO75417 2590 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 HBDP02042 147 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 SLC25A16P16260 332 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 FOXE3Q13461 319 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 TMEM95Q3KNT9 176 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 MAPK1IP1LQ8NDC0 245 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 TMEM208Q9BTX3 173 aa15.65■□□□□ 0.1
VEGFA-204ENST00000372064 TFPI2P48307 235 aa15.64■□□□□ 0.09
VEGFA-204ENST00000372064 ZNF738Q8NE65 137 aa15.64■□□□□ 0.09
VEGFA-204ENST00000372064 A0A0G2JLM5 398 aa15.64■□□□□ 0.09
VEGFA-204ENST00000372064 DEFB112Q30KQ8 113 aa15.64■□□□□ 0.09
VEGFA-204ENST00000372064 PMCHL2Q9BQD1 86 aa15.64■□□□□ 0.09
VEGFA-204ENST00000372064 LRRK2Q5S007 2527 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 IGHV4-4A0A075B6R2 117 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 A1L4Q6 167 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 IGHV4-59P01825 116 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 GAGE1Q13065 139 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 PRR9Q5T870 116 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 LINC01356Q8N9X3 169 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 LINC00477Q96M19 166 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 MAP1LC3AQ9H492 121 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 A0A096LNT2 108 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 SNAI2O43623 268 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 GAS8-AS1O95177 125 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 FBN2P35556 2912 aa15.63■□□□□ 0.09
VEGFA-204ENST00000372064 OVOL1O14753 267 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 HINT1P49773 126 aaPredicted RBP15.62■□□□□ 0.09
VEGFA-204ENST00000372064 DEFB1P60022 68 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 SLC25A34Q6PIV7 304 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 OR8A1Q8NGG7 326 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 TP73-AS1Q9UF72 201 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 SELENOKQ9Y6D0 94 aa15.62■□□□□ 0.09
VEGFA-204ENST00000372064 ANKRD17O75179 2603 aaKnown RBP15.61■□□□□ 0.09
VEGFA-204ENST00000372064 DLEU1O43261 78 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 TNFRSF6BO95407 300 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 SRSF1Q07955 248 aaKnown RBP eCLIP15.61■□□□□ 0.099e-8■■■□□ 14.6
VEGFA-204ENST00000372064 LGALS9BQ3B8N2 356 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 LGALS9CQ6DKI2 356 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 COX6B1P14854 86 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 IGKV3-7A0A075B6H7 116 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 FXYD7P58549 80 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 RPL11P62913 178 aaKnown RBP15.61■□□□□ 0.09
VEGFA-204ENST00000372064 TM4SF20Q53R12 229 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 ZFAND2AQ8N6M9 145 aa15.61■□□□□ 0.09
VEGFA-204ENST00000372064 OR10J6PQ8NGY7 276 aa15.6■□□□□ 0.09
VEGFA-204ENST00000372064 FAM19A4Q96LR4 140 aa15.6■□□□□ 0.09
VEGFA-204ENST00000372064 NXT2Q9NPJ8 142 aaKnown RBP15.6■□□□□ 0.09
VEGFA-204ENST00000372064 J3KRW8 73 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 TGFAP01135 160 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 CACNG7P62955 275 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 RHPN1-AS1Q9BWJ2 59 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 EVI2AP22794 236 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 DPF1Q92782 380 aa15.59■□□□□ 0.09
VEGFA-204ENST00000372064 GOLT1BQ9Y3E0 138 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms