RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 MT-ND6P03923 174 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 HOXA5P20719 270 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 TFPI2P48307 235 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 ZNF575Q86XF7 245 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 FABP5P3A8MUU1 101 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 TCF21O43680 179 aa13.15□□□□□ -0.3
SSBP3-203ENST00000371319 HIST1H1AQ02539 215 aaPredicted RBP13.15□□□□□ -0.3
SSBP3-203ENST00000371319 TMSB15BA0A087X1C1 80 aa13.14□□□□□ -0.31
SSBP3-203ENST00000371319 CCL24O00175 119 aa13.14□□□□□ -0.31
SSBP3-203ENST00000371319 HLA-DQA1P01909 254 aa13.14□□□□□ -0.31
SSBP3-203ENST00000371319 RAB4BP61018 213 aa13.14□□□□□ -0.31
SSBP3-203ENST00000371319 PRR9Q5T870 116 aa13.14□□□□□ -0.31
SSBP3-203ENST00000371319 CRLF1O75462 422 aa13.13□□□□□ -0.31
SSBP3-203ENST00000371319 ZNF688P0C7X2 276 aa13.13□□□□□ -0.31
SSBP3-203ENST00000371319 RPS20P60866 119 aaKnown RBP13.13□□□□□ -0.31
SSBP3-203ENST00000371319 HBBP68871 147 aa13.13□□□□□ -0.31
SSBP3-203ENST00000371319 LINC01559Q495D7 138 aa13.13□□□□□ -0.31
SSBP3-203ENST00000371319 ZFAND2AQ8N6M9 145 aa13.13□□□□□ -0.31
SSBP3-203ENST00000371319 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
SSBP3-203ENST00000371319 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
SSBP3-203ENST00000371319 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
SSBP3-203ENST00000371319 COA6Q5JTJ3 125 aaKnown RBP13.12□□□□□ -0.31
SSBP3-203ENST00000371319 GFI1BQ5VTD9 330 aa13.12□□□□□ -0.31
SSBP3-203ENST00000371319 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
SSBP3-203ENST00000371319 CAMPP49913 170 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 KRTAP10-3P60369 221 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 SNRPD3P62318 126 aaKnown RBP13.11□□□□□ -0.31
SSBP3-203ENST00000371319 Q6AWC8 147 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 MTORP42345 2549 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 NOTCH2Q04721 2471 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 TRBV7-9A0A0J9YWB2 115 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 APCSP02743 223 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 ORM1P02763 201 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 ARMS2P0C7Q2 107 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 SLAQ13239 276 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 Q6ZQT7 251 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
SSBP3-203ENST00000371319 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 A0A1B0GUT8 65 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 IGLC6P0CF74 106 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 CRISP2P16562 243 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 PAFAH1B2P68402 229 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 KIAA1644Q3SXP7 199 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 LYZL1Q6UWQ5 148 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 HIST3H2BBQ8N257 126 aa13.1□□□□□ -0.31
SSBP3-203ENST00000371319 A0A0J9YX75 114 aa13.09□□□□□ -0.31
SSBP3-203ENST00000371319 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
SSBP3-203ENST00000371319 DYNLRB2Q8TF09 96 aa13.09□□□□□ -0.31
SSBP3-203ENST00000371319 SSBP4Q9BWG4 385 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-203ENST00000371319 GRIFINA4D1Z8 144 aa13.08□□□□□ -0.32
SSBP3-203ENST00000371319 CTRLP40313 264 aa13.08□□□□□ -0.32
SSBP3-203ENST00000371319 RIGQ13278 110 aa13.08□□□□□ -0.32
SSBP3-203ENST00000371319 FER1L6-AS1Q8NA97 138 aa13.08□□□□□ -0.32
SSBP3-203ENST00000371319 GATD1Q8NB37 220 aa13.08□□□□□ -0.32
SSBP3-203ENST00000371319 A0A1B0GUS0 222 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 J3KRW8 73 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 CD33P20138 364 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 AKR1D1P51857 326 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 PRR31Q5SQ13 230 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 NF1P21359 2839 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 KIR3DS1Q14943 382 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 SIGLEC8Q9NYZ4 499 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 TP53TG3Q9ULZ0 132 aa13.07□□□□□ -0.32
SSBP3-203ENST00000371319 HIVEP1P15822 2718 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 A0A1B0GW15 77 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 KLLNB2CW77 178 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 GPX1P07203 203 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 CD300EQ496F6 205 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-203ENST00000371319 PDZD11Q5EBL8 140 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 FOXI2Q6ZQN5 318 aa13.06□□□□□ -0.32
SSBP3-203ENST00000371319 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
SSBP3-203ENST00000371319 TRAV21A0A0B4J279 112 aa13.05□□□□□ -0.32
SSBP3-203ENST00000371319 SRIP30626 198 aa13.05□□□□□ -0.32
SSBP3-203ENST00000371319 RNASE4P34096 147 aaKnown RBP13.05□□□□□ -0.32
SSBP3-203ENST00000371319 Q0VG73 95 aa13.05□□□□□ -0.32
SSBP3-203ENST00000371319 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
SSBP3-203ENST00000371319 BORCS7Q96B45 105 aa13.05□□□□□ -0.32
SSBP3-203ENST00000371319 NDUFA11Q86Y39 141 aa13.04□□□□□ -0.32
SSBP3-203ENST00000371319 TMEM256Q8N2U0 113 aa13.04□□□□□ -0.32
SSBP3-203ENST00000371319 TRAV25A0A0B4J276 109 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 F2Z2F3 143 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
SSBP3-203ENST00000371319 S100A8P05109 93 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 LEPP41159 167 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 LINC00310P59036 64 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 CNFNQ9BYD5 112 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 NUPR1O60356 82 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 DEFB131AP59861 70 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 ZNF493Q6ZR52 646 aa13.03□□□□□ -0.32
SSBP3-203ENST00000371319 SPAG8Q99932 426 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-203ENST00000371319 ALKBH7Q9BT30 221 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms