RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
VPS37B-202ENST00000371248 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 AURKAIP1Q9NWT8 199 aaPredicted RBP13.12□□□□□ -0.31
VPS37B-202ENST00000371248 C20orf202A1L168 122 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 ZNF705FA8MVS1 300 aaPredicted RBP13.11□□□□□ -0.31
VPS37B-202ENST00000371248 M0R3E3 92 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 OR11H12B2RN74 326 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 CMC4P56277 68 aaPredicted RBP13.11□□□□□ -0.31
VPS37B-202ENST00000371248 APRG1Q8IVJ8 170 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 ZNF738Q8NE65 137 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 ORAOV1Q8WV07 137 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 MIEN1Q9BRT3 115 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 MANBALQ9NQG1 85 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 AGRNO00468 2067 aa13.11□□□□□ -0.31
VPS37B-202ENST00000371248 SRP19P09132 144 aaKnown RBP13.1□□□□□ -0.31
VPS37B-202ENST00000371248 DEFB1P60022 68 aa13.1□□□□□ -0.31
VPS37B-202ENST00000371248 SRD5A3Q9H8P0 318 aa13.1□□□□□ -0.31
VPS37B-202ENST00000371248 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 IFNA1P01562 189 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 PMS2P11Q13670 270 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 ZNF705AQ6ZN79 300 aaPredicted RBP13.09□□□□□ -0.31
VPS37B-202ENST00000371248 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 C19orf73Q9NVV2 129 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 ARL2-SNX15V9GYD0 113 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 RBFOX3A6NFN3 312 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 SLC25A5P05141 298 aaKnown RBP13.09□□□□□ -0.31
VPS37B-202ENST00000371248 ATP5G3P48201 142 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 CMTM2Q8TAZ6 248 aa13.09□□□□□ -0.31
VPS37B-202ENST00000371248 RPUSD4Q96CM3 377 aaKnown RBP13.09□□□□□ -0.31
VPS37B-202ENST00000371248 F6UB75 175 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 Q8N1Y9 231 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 FAM110AQ9BQ89 295 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 NIPSNAP3BQ9BS92 247 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 RPH3ALQ9UNE2 315 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 PRAC2D3DTV9 90 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 CSN1S1P47710 185 aa13.08□□□□□ -0.32
VPS37B-202ENST00000371248 KPRPQ5T749 579 aaPredicted RBP13.08□□□□□ -0.32
VPS37B-202ENST00000371248 MRPL53Q96EL3 112 aaKnown RBP13.08□□□□□ -0.32
VPS37B-202ENST00000371248 C11orf94C9JXX5 98 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 CCL25O15444 150 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 BCL2P10415 239 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 GNG5P63218 68 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 PNRC1Q12796 327 aaPredicted RBP13.07□□□□□ -0.32
VPS37B-202ENST00000371248 DEFB125Q8N687 156 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 RARRES2Q99969 163 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 PYGO2Q9BRQ0 406 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 DNAH3Q8TD57 4116 aa13.07□□□□□ -0.32
VPS37B-202ENST00000371248 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 C5orf17Q8NAS9 161 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 OR2D3Q8NGH3 330 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 XKRY2A2RUG3 117 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 KNCNA6PVL3 124 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 ZNF705DP0CH99 300 aaPredicted RBP13.06□□□□□ -0.32
VPS37B-202ENST00000371248 ZNF705BP0CI00 300 aaPredicted RBP13.06□□□□□ -0.32
VPS37B-202ENST00000371248 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 NAGKQ9UJ70 344 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 EPDR1Q9UM22 224 aa13.06□□□□□ -0.32
VPS37B-202ENST00000371248 LOC102723971A0A1B0GUV8 181 aa13.05□□□□□ -0.32
VPS37B-202ENST00000371248 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
VPS37B-202ENST00000371248 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
VPS37B-202ENST00000371248 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
VPS37B-202ENST00000371248 FOXI2Q6ZQN5 318 aa13.05□□□□□ -0.32
VPS37B-202ENST00000371248 MEF2BQ02080 365 aaPredicted RBP13.04□□□□□ -0.32
VPS37B-202ENST00000371248 ZNF506Q5JVG8 444 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 IGKV2-40A0A087WW87 121 aaPredicted RBP13.04□□□□□ -0.32
VPS37B-202ENST00000371248 A0A0J9YX75 114 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 IGKV2D-40P01614 121 aaPredicted RBP13.04□□□□□ -0.32
VPS37B-202ENST00000371248 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
VPS37B-202ENST00000371248 UBE2V1Q13404 147 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 TXNDC17Q9BRA2 123 aa13.04□□□□□ -0.32
VPS37B-202ENST00000371248 ALKBH7Q9BT30 221 aaPredicted RBP13.04□□□□□ -0.32
VPS37B-202ENST00000371248 TCRAP04437 139 aa13.03□□□□□ -0.32
VPS37B-202ENST00000371248 GOLT1AQ6ZVE7 132 aa13.03□□□□□ -0.32
VPS37B-202ENST00000371248 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
VPS37B-202ENST00000371248 OR4B1Q8NGF8 309 aa13.03□□□□□ -0.32
VPS37B-202ENST00000371248 OR10J6PQ8NGY7 276 aa13.03□□□□□ -0.32
VPS37B-202ENST00000371248 A6NJY4 79 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 SCGB1D1O95968 90 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 ERCC8Q13216 396 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 STHQ8IWL8 128 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 IMMP2LQ96T52 175 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
VPS37B-202ENST00000371248 F6UZH7 168 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 H3BMM0 161 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 PEX7O00628 323 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 CNN1P51911 297 aaKnown RBP13.01□□□□□ -0.33
VPS37B-202ENST00000371248 TEX43Q6ZNM6 134 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 VGLL1Q99990 258 aa13.01□□□□□ -0.33
VPS37B-202ENST00000371248 SCO2A0A1W2PP80 73 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms