RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ATRAIDQ6UW56 229 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 ADAMTSL5Q6ZMM2 481 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 OR11H1Q8NG94 326 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 DLX4Q92988 240 aaPredicted RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 CITED1Q99966 193 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 PAXXQ9BUH6 204 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 RABAC1Q9UI14 185 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 TSSC4Q9Y5U2 329 aaPredicted RBP2.67□□□□□ -1.98
MCF2-202ENST00000370573 SELENOKQ9Y6D0 94 aa2.67□□□□□ -1.98
MCF2-202ENST00000370573 TRAV26-1A0A087WT03 109 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 TMEM213A2RRL7 107 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 RBFOX3A6NFN3 312 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 K7EMT4 169 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 M0R143 59 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 OR7C2O60412 319 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 CXorf1O96002 111 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 HBE1P02100 147 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 CD5P06127 495 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 SEC61GP60059 68 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 GUK1Q16774 197 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 RPEL1Q2QD12 228 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 NSUN5P1Q3KNT7 163 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 FAM106AQ4KMX7 169 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 KHDC3LQ587J8 217 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 PRSS3P2Q8NHM4 247 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 ZNF586Q9NXT0 402 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 TMEM14CQ9P0S9 112 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 GNG13Q9P2W3 67 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 SMPXQ9UHP9 88 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 YTHDF2Q9Y5A9 579 aaKnown RBP2.66□□□□□ -1.98
MCF2-202ENST00000370573 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 A8MWP6 167 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 K7EP13 123 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 LGALS9O00182 355 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 IGKV2-30P06310 120 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 IGLC2P0DOY2 106 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 HIST1H1EP10412 219 aaKnown RBP2.66□□□□□ -1.98
MCF2-202ENST00000370573 PSMB3P49720 205 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 TAS2R45P59539 299 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 UBE2G2P60604 165 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 RHEBQ15382 184 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 ZNF506Q5JVG8 444 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 FAM210BQ96KR6 192 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 METTL26Q96S19 204 aa2.66□□□□□ -1.98
MCF2-202ENST00000370573 TRBV19A0A075B6N1 114 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 C2orf70A6NJV1 201 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 SLC17A3O00476 420 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 SRP19P09132 144 aaKnown RBP2.65□□□□□ -1.98
MCF2-202ENST00000370573 NBEAP1P0C6P0 100 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 BCL2P10415 239 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 CBLN1P23435 193 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 MYCNOSP40205 109 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 ATP5G3P48201 142 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 UBE2L3P68036 154 aaKnown RBP2.65□□□□□ -1.98
MCF2-202ENST00000370573 C1orf194Q5T5A4 169 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 NDUFA11Q86Y39 141 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 BPIFA4PQ86YQ2 179 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 OR8I2Q8N0Y5 310 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 Q8N9P0 234 aaPredicted RBP2.65□□□□□ -1.98
MCF2-202ENST00000370573 STXBP6Q8NFX7 210 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 SPATA3Q8NHX4 192 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 BLNKQ8WV28 456 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 RHPN1-AS1Q9BWJ2 59 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 EIF5A2Q9GZV4 153 aaKnown RBP2.65□□□□□ -1.98
MCF2-202ENST00000370573 SMDT1Q9H4I9 107 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 DAZ1Q9NQZ3 744 aaKnown RBP2.65□□□□□ -1.98
MCF2-202ENST00000370573 TMEM167BQ9NRX6 74 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 UFC1Q9Y3C8 167 aa2.65□□□□□ -1.98
MCF2-202ENST00000370573 PKD1L1Q8TDX9 2849 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 IGLV5-39A0A0G2JS06 123 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 GGTLC3B5MD39 225 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 GCGP01275 180 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 PRB4P10163 310 aaPredicted RBP2.65□□□□□ -1.99
MCF2-202ENST00000370573 RPL7P18124 248 aaKnown RBP2.65□□□□□ -1.99
MCF2-202ENST00000370573 RAB5AP20339 215 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 HLA-DMBP28068 263 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 RANP62826 216 aaKnown RBP2.65□□□□□ -1.99
MCF2-202ENST00000370573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 OR9G4Q8NGQ1 327 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 TREM1Q9NP99 234 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 MANBALQ9NQG1 85 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 VAX2Q9UIW0 290 aa2.65□□□□□ -1.99
MCF2-202ENST00000370573 SORL1Q92673 2214 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 TRAV8-2A0A0B4J237 113 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 A0A1W2PRE2 83 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 A0A1W2PS18 150 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 PGPA6NDG6 321 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 C11orf94C9JXX5 98 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 IFNA1P01562 189 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 RBX1P62877 108 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 TMEM241Q24JQ0 296 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 PYY3Q5JQD4 70 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 TCF24Q7RTU0 167 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 S100A7AQ86SG5 101 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 EXOC3-AS1Q8N2X6 119 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 OR4F17Q8NGA8 305 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 HIST1H2BAQ96A08 127 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 OR4F4Q96R69 305 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 TMEM208Q9BTX3 173 aa2.64□□□□□ -1.99
MCF2-202ENST00000370573 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms