RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 LINC00527Q9UJ94 153 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 PRSS46E5RG02 174 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 CRYGSP22914 178 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 NBL1P41271 181 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 SPATA12Q7Z6I5 190 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 SPTSSBQ8NFR3 76 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 TMEM167AQ8TBQ9 72 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 PLA2G2EQ9NZK7 142 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 PLXNA2O75051 1894 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 CRLF1O75462 422 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
LCA5-201ENST00000369846 IL15RAQ13261 267 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 C8orf49Q96NF6 230 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 IGKV1-6A0A0C4DH72 117 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 SHISA9B4DS77 424 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 C21orf140B9A014 251 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 H0YJW9 148 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 OVOL1O14753 267 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 NDUFB8O95169 186 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 IGHG3P01860 377 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 KLF5Q13887 457 aaPredicted RBP6.9□□□□□ -1.3
LCA5-201ENST00000369846 PCOLCEQ15113 449 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
LCA5-201ENST00000369846 TRAV25A0A0B4J276 109 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 M0R1W7 72 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 FRYLO94915 3013 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 FHL1Q13642 323 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 C1orf210Q8IVY1 113 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 KLHL30-AS1Q8NEE0 82 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 C11orf52Q96A22 123 aa6.9□□□□□ -1.31
LCA5-201ENST00000369846 RNF166Q96A37 237 aaPredicted RBP6.9□□□□□ -1.31
LCA5-201ENST00000369846 A0A087WX48 190 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 AHRRA9YTQ3 701 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 FAM120AOSQ5T036 256 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 SIGLEC15Q6ZMC9 328 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 LYPD1Q8N2G4 141 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 COL4A6Q14031 1691 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 TRGV11A0A075B6L2 103 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 A4D1N5 150 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 NXPH4O95158 308 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 IGHV3-53P01767 116 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
LCA5-201ENST00000369846 ZIC4Q8N9L1 334 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 TP73-AS1Q9UF72 201 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 METRNQ9UJH8 293 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 KIAA1549LQ6ZVL6 1849 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 SDHAF1A6NFY7 115 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 PATE3B3GLJ2 98 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 M0QXV9 152 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 SMIM2Q9BVW6 85 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 F5H768 121 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 LTAP01374 205 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 CRYGBP07316 175 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 FRMD6-AS1P0C7T7 363 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 COX6A1P12074 109 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 RPL36AP83881 106 aaKnown RBP6.89□□□□□ -1.31
LCA5-201ENST00000369846 RPL36ALQ969Q0 106 aaKnown RBP6.89□□□□□ -1.31
LCA5-201ENST00000369846 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 FRYQ5TBA9 3013 aa6.89□□□□□ -1.31
LCA5-201ENST00000369846 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 A0A1W2PPI3 338 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 NRN1LQ496H8 165 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 DTX2Q86UW9 622 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 MPLKIPQ8TAP9 179 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 IGKV1-16P04430 117 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 PSMB8P28062 276 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 C15orf32Q32M92 178 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 WIPF2Q8TF74 440 aaPredicted RBP6.88□□□□□ -1.31
LCA5-201ENST00000369846 YLPM1P49750 1951 aaKnown RBP6.88□□□□□ -1.31
LCA5-201ENST00000369846 EFNA2O43921 213 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 IGKV1-39P01597 117 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 IGKV1D-39P04432 117 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 PAX8Q06710 450 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 FAM90A1Q86YD7 464 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 SP7Q8TDD2 431 aaPredicted RBP6.88□□□□□ -1.31
LCA5-201ENST00000369846 DSCR8Q96T75 97 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 F6UB75 175 aa6.88□□□□□ -1.31
LCA5-201ENST00000369846 DUSP14O95147 198 aaKnown RBP6.88□□□□□ -1.31
LCA5-201ENST00000369846 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 TRAV12-2A0A075B6T6 113 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 OBSL1O75147 1896 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 CLPSL1A2RUU4 121 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 EGR2P11161 476 aaPredicted RBP6.87□□□□□ -1.31
LCA5-201ENST00000369846 WFDC11Q8NEX6 87 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 TMEM141Q96I45 108 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 FREM2Q5SZK8 3169 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 IGHG2P01859 326 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 GATA1P15976 413 aaPredicted RBP6.87□□□□□ -1.31
LCA5-201ENST00000369846 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 WFDC9Q8NEX5 89 aa6.87□□□□□ -1.31
LCA5-201ENST00000369846 C1orf147Q96MC9 270 aaPredicted RBP6.87□□□□□ -1.31
LCA5-201ENST00000369846 F8WEM9 126 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 HERVK_113P63121 156 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 SLC25A45Q8N413 288 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 TMEM75Q8N9X5 138 aa6.86□□□□□ -1.31
LCA5-201ENST00000369846 NCOR2Q9Y618 2525 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms