RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 IGKV1-17P01599 117 aa12.52□□□□□ -0.4
SYNCRIP-202ENST00000369622 IGHV3-35A0A0C4DH35 117 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 A0A1B0GUT8 65 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 TMEM213A2RRL7 107 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 TMEM160Q9NX00 188 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 COL6A6A6NMZ7 2263 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 BSNQ9UPA5 3926 aa12.52□□□□□ -0.41
SYNCRIP-202ENST00000369622 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 IGLV1-47P01700 117 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 ZC2HC1BQ5TFG8 222 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 AJUBAQ96IF1 538 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 ZNF492Q9P255 531 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 C8orf31Q8N9H6 132 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 DPF1Q92782 380 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 KAAG1Q9UBP8 84 aa12.51□□□□□ -0.41
SYNCRIP-202ENST00000369622 I3L2K1 104 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 IGLV2-11P01706 119 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 HBDP02042 147 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 CD3EP07766 207 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 CT83Q5H943 113 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 CARD19Q96LW7 228 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 C8orf49Q96NF6 230 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 CRYGBP07316 175 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 PPDPFQ9H3Y8 114 aa12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
SYNCRIP-202ENST00000369622 ATRXP46100 2492 aa12.49□□□□□ -0.41
SYNCRIP-202ENST00000369622 MUC6Q6W4X9 2439 aa12.49□□□□□ -0.41
SYNCRIP-202ENST00000369622 TRBV19A0A075B6N1 114 aa12.49□□□□□ -0.41
SYNCRIP-202ENST00000369622 CT45A10P0DMU9 189 aa12.49□□□□□ -0.41
SYNCRIP-202ENST00000369622 IGFL4Q6B9Z1 124 aa12.49□□□□□ -0.41
SYNCRIP-202ENST00000369622 NCBP2LA6PVI3 153 aaKnown RBP12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 RIGQ13278 110 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 RNF125Q96EQ8 232 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 FOXC2Q99958 501 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GFRA4Q9GZZ7 299 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE7O76087 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 GAGE4Q13068 117 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 HAX1O00165 279 aa12.48□□□□□ -0.41
SYNCRIP-202ENST00000369622 K7EIM0 57 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 GRNP28799 593 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 Q8NA96 180 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 YAE1D1Q9NRH1 226 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 M0QXV9 152 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 SPTAN1Q13813 2472 aaKnown RBP12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
SYNCRIP-202ENST00000369622 TRAV40A0A0B4J280 105 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 WI2-2373I1.2A0A1W2PRP0 233 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 CRIP1P50238 77 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 FAM159AQ6UWV7 190 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 ZNF491Q8N8L2 437 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 B9A039 149 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 SIGLEC15Q6ZMC9 328 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 HHLA3Q9XRX5 114 aa12.46□□□□□ -0.41
SYNCRIP-202ENST00000369622 PTPRQQ9UMZ3 2332 aa12.46□□□□□ -0.42
SYNCRIP-202ENST00000369622 GAS8-AS1O95177 125 aa12.46□□□□□ -0.42
SYNCRIP-202ENST00000369622 NPYP01303 97 aa12.46□□□□□ -0.42
SYNCRIP-202ENST00000369622 CFAP126Q5VTH2 177 aa12.46□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGKV2-40A0A087WW87 121 aaPredicted RBP12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 TRAV4A0A0B4J268 109 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 FABP5P3A8MUU1 101 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 CRLF1O75462 422 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGKV2D-40P01614 121 aaPredicted RBP12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 Q8TAT8 98 aa12.45□□□□□ -0.42
SYNCRIP-202ENST00000369622 TMEM8BA6NDV4 472 aa12.44□□□□□ -0.42
SYNCRIP-202ENST00000369622 EVI2AP22794 236 aa12.44□□□□□ -0.42
SYNCRIP-202ENST00000369622 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
SYNCRIP-202ENST00000369622 LINC01549A6NIU2 74 aa12.44□□□□□ -0.42
SYNCRIP-202ENST00000369622 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
SYNCRIP-202ENST00000369622 NBR2O15453 112 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 CKS2P33552 79 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 LEPP41159 167 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 NDUFV3P56181 108 aaKnown RBP12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 GAGE2BQ13066 116 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 GAGE2EQ4V326 116 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 PVRIGQ6DKI7 326 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 GAGE2DQ9UEU5 116 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 H3BRN7 92 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 NDUFA3O95167 84 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGKCP01834 107 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 MORN3Q6PF18 240 aaPredicted RBP12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 Q6ZQT7 251 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 IGF2RP11717 2491 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 DPM3Q9P2X0 92 aa12.43□□□□□ -0.42
SYNCRIP-202ENST00000369622 TMEM75Q8N9X5 138 aa12.42□□□□□ -0.42
SYNCRIP-202ENST00000369622 HIGD1BQ9P298 99 aa12.42□□□□□ -0.42
SYNCRIP-202ENST00000369622 ORMDL3Q8N138 153 aa12.42□□□□□ -0.42
SYNCRIP-202ENST00000369622 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms