RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 IGHG4P01861 327 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 PRSS33Q8NF86 280 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 S4R3C0 116 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 H3BVH4 76 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 GFRALQ6UXV0 394 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 SEM1Q6ZVN7 128 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
CHD1L-203ENST00000369259 RHODO00212 210 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 HLA-DMBP28068 263 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 NDUFA11Q86Y39 141 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 NEXN-AS1Q8NBZ9 246 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 SCGB3A1Q96QR1 104 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 TRBV7-9A0A0J9YWB2 115 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 TMEM178BH3BS89 294 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 CFHR4Q92496 578 aa12.5□□□□□ -0.41
CHD1L-203ENST00000369259 PLCE1Q9P212 2302 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 FAM110AQ9BQ89 295 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 VKORC1Q9BQB6 163 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 ERCC8Q13216 396 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 SHISA2Q6UWI4 295 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 ASCL5Q7RTU5 278 aa12.49□□□□□ -0.41
CHD1L-203ENST00000369259 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 C17orf100A8MU93 164 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 COX6B1P14854 86 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 SLC25A16P16260 332 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 NDUFV3P56181 108 aaKnown RBP12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE2EQ4V326 116 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 TOMM6Q96B49 74 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE2DQ9UEU5 116 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 SMAD5-AS1Q9Y6J3 95 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 DMDP11532 3685 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 MBD3L4A6NDZ8 208 aaPredicted RBP12.48□□□□□ -0.41
CHD1L-203ENST00000369259 MBD3L3A6NE82 208 aaPredicted RBP12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 MBD3L5A6NJ08 208 aaPredicted RBP12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE7O76087 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 IGLV1-47P01700 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE12FP0CL80 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE12GP0CL81 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE12IP0CL82 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 GAGE4Q13068 117 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
CHD1L-203ENST00000369259 CCL17Q92583 94 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 SMIM2Q9BVW6 85 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 KLK15Q9H2R5 256 aa12.48□□□□□ -0.41
CHD1L-203ENST00000369259 ZNF318Q5VUA4 2279 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 BUB1B-PAK6H3BSN5 160 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 ASIPP42127 132 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 MFAP4P55083 255 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 DLX1P56177 255 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 RNF5Q99942 180 aa12.47□□□□□ -0.41
CHD1L-203ENST00000369259 HERV-K104P63124 156 aa12.46□□□□□ -0.41
CHD1L-203ENST00000369259 PRB3Q04118 309 aaPredicted RBP12.46□□□□□ -0.41
CHD1L-203ENST00000369259 MALRD1Q5VYJ5 2156 aa12.46□□□□□ -0.41
CHD1L-203ENST00000369259 SNCGO76070 127 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 SCGB1C2P0DMR2 95 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 ANXA2RQ3ZCQ2 193 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 C22orf34Q6ZV56 151 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 NUP37Q8NFH4 326 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 C11orf21Q9P2W6 132 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 TGFAP01135 160 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 CD59P13987 128 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 BAALCQ8WXS3 180 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 RASL10AQ92737 203 aa12.45□□□□□ -0.42
CHD1L-203ENST00000369259 IGHV7-4-1A0A0J9YVY3 117 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 PRAC2D3DTV9 90 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 CCDC179H3BU77 68 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 C10orf126Q8N4M7 172 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 KLHL30-AS1Q8NEE0 82 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
CHD1L-203ENST00000369259 M0QXV9 152 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 SLC25A20O43772 301 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 CFC1P0CG37 223 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 PRTN3P24158 256 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 TMEM95Q3KNT9 176 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 TTC32Q5I0X7 151 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 KAAG1Q9UBP8 84 aa12.44□□□□□ -0.42
CHD1L-203ENST00000369259 IGHV4-4A0A075B6R2 117 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 TRAV4A0A0B4J268 109 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 A0A0J9YY99 117 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 IFITM1P13164 125 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 RPL32P62910 135 aaKnown RBP12.43□□□□□ -0.42
CHD1L-203ENST00000369259 SPANXN1Q5VSR9 72 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 FDCSPQ8NFU4 85 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 SMIM20Q8N5G0 67 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
CHD1L-203ENST00000369259 TRAV17A0A0B4J275 112 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 RBAKDNA6NC62 111 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 ADIPOQQ15848 244 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 LPAL2Q16609 132 aa12.42□□□□□ -0.42
CHD1L-203ENST00000369259 IGLV11-55A0A075B6I3 123 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms