RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CRYGCP07315 174 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 EGR2P11161 476 aaPredicted RBP8.29□□□□□ -1.08
TPM3-212ENST00000368533 SLC25A16P16260 332 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 DEFB112Q30KQ8 113 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 FAM231DQ6ZW35 169 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
TPM3-212ENST00000368533 SMPXQ9UHP9 88 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 IGHV3OR16-13A0A075B7E8 117 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 A0A096LNT2 108 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 IGHV3-74A0A0B4J1X5 117 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 K7EIM0 57 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 K7ERJ3 54 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 GATA3P23771 443 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 MAP1LC3CQ9BXW4 147 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 GP9P14770 177 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 HBBP68871 147 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 MBD6Q96DN6 1003 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 FANCD2OSQ96PS1 177 aa8.29□□□□□ -1.08
TPM3-212ENST00000368533 I3L2K1 104 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 K7EQM0 130 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 CRXO43186 299 aaPredicted RBP8.28□□□□□ -1.08
TPM3-212ENST00000368533 IL4P05112 153 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 IGHV4-31P0DP07 118 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 COX8AP10176 69 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
TPM3-212ENST00000368533 WFDC2Q14508 124 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 FMC1Q96HJ9 113 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 C17orf77Q96MU5 243 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 C18orf15Q96N68 181 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 RNF5Q99942 180 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 IGHV3-49A0A0A0MS15 119 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 A0A1W2PPM0 123 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 MYCNOSP40205 109 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 INSL3P51460 131 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 KLF5Q13887 457 aaPredicted RBP8.28□□□□□ -1.08
TPM3-212ENST00000368533 ADAMTSL5Q6ZMM2 481 aa8.28□□□□□ -1.08
TPM3-212ENST00000368533 H3BRM9 83 aa8.27□□□□□ -1.08
TPM3-212ENST00000368533 PSG3Q16557 428 aa8.27□□□□□ -1.08
TPM3-212ENST00000368533 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.08
TPM3-212ENST00000368533 BEX4Q9NWD9 120 aaPredicted RBP8.27□□□□□ -1.08
TPM3-212ENST00000368533 C1RLQ9NZP8 487 aa8.27□□□□□ -1.08
TPM3-212ENST00000368533 IGHV3-66A0A0C4DH42 116 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 OOSP1A8MZH6 123 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 DSCR9P59020 149 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 SEC11AP67812 179 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
TPM3-212ENST00000368533 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 WNK1Q9H4A3 2382 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 EBI3Q14213 229 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 C10orf99Q6UWK7 81 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 GTSF1Q8WW33 167 aa8.27□□□□□ -1.09
TPM3-212ENST00000368533 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 A6NDN8 102 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 ETDBQ3ZM63 59 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 RASL11AQ6T310 242 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 PCP2Q8IVA1 136 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 OTORQ9NRC9 128 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 KLF12Q9Y4X4 402 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 FAM106AQ4KMX7 169 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 CFAP161Q6P656 301 aa8.26□□□□□ -1.09
TPM3-212ENST00000368533 RBPMS2Q6ZRY4 209 aaKnown RBP8.26□□□□□ -1.09
TPM3-212ENST00000368533 WIPF2Q8TF74 440 aaPredicted RBP8.26□□□□□ -1.09
TPM3-212ENST00000368533 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
TPM3-212ENST00000368533 M0R3E3 92 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 LTAP01374 205 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 FABP2P12104 132 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 NMUP48645 174 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 CD300EQ496F6 205 aaPredicted RBP8.25□□□□□ -1.09
TPM3-212ENST00000368533 SAMD5Q5TGI4 173 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 Q86TA4 180 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 SS18L2Q9UHA2 77 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 MOB4Q9Y3A3 225 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 FGF6P10767 208 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 AMTNQ6UX39 209 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 RNF125Q96EQ8 232 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 SMR3AQ99954 134 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 SRSF8Q9BRL6 282 aaKnown RBP8.25□□□□□ -1.09
TPM3-212ENST00000368533 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 PPIFP30405 207 aaKnown RBP8.25□□□□□ -1.09
TPM3-212ENST00000368533 ATP5L2Q7Z4Y8 100 aa8.25□□□□□ -1.09
TPM3-212ENST00000368533 IGLV11-55A0A075B6I3 123 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 GCSHP23434 173 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 ZNF48Q96MX3 618 aaPredicted RBP8.24□□□□□ -1.09
TPM3-212ENST00000368533 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 HIVEP2P31629 2446 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 SERTM2A0A1B0GWG4 89 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 CLEC3BP05452 202 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 SPAG8Q99932 426 aaPredicted RBP8.24□□□□□ -1.09
TPM3-212ENST00000368533 KLK15Q9H2R5 256 aa8.24□□□□□ -1.09
TPM3-212ENST00000368533 LOC389332A0A1B0GUA5 103 aa8.23□□□□□ -1.09
TPM3-212ENST00000368533 CT45A10P0DMU9 189 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms