RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 A0A1W2PRE2 83 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 PRM2P04554 102 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 CDKN1BP46527 198 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 GNG5P63218 68 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 BTN1A1Q13410 526 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 CASC10Q5T4H9 136 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
SMPDL3A-201ENST00000368440 PGPA6NDG6 321 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 J3KRW8 73 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 SLC25A5P05141 298 aaKnown RBP10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 NEU1Q99519 415 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 TXNDC17Q9BRA2 123 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 RPS10P5Q9NQ39 176 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 OTORQ9NRC9 128 aa10.86□□□□□ -0.67
SMPDL3A-201ENST00000368440 PGPEP1LA6NFU8 196 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 GFI1BQ5VTD9 330 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 TMEM88Q6PEY1 159 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 ARL2-SNX15V9GYD0 113 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 DIRC3C9JPN6 131 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 ADIRFQ15847 76 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 Q8TAT8 98 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 FAM19A4Q96LR4 140 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 CELA1Q9UNI1 258 aa10.85□□□□□ -0.67
SMPDL3A-201ENST00000368440 C7orf77A4D0Y5 90 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 CSN1S1P47710 185 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 NANOS2P60321 138 aaKnown RBP10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 CBLN2Q8IUK8 224 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 LINC00479Q96M42 142 aa10.84□□□□□ -0.67
SMPDL3A-201ENST00000368440 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 LEPP41159 167 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 RPL35P42766 123 aaKnown RBP10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 FAM74A3Q4VXF1 159 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 TMEM78Q5T7P6 136 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 SGK494Q96LW2 274 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 SDF2L1Q9HCN8 221 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 NAT8Q9UHE5 227 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 TRAV34A0A0B4J273 112 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 TSPOP30536 169 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 PRR9Q5T870 116 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 C11orf45Q8TAV5 145 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 C11orf52Q96A22 123 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 ZNF492Q9P255 531 aa10.83□□□□□ -0.68
SMPDL3A-201ENST00000368440 PEX7O00628 323 aa10.82□□□□□ -0.68
SMPDL3A-201ENST00000368440 EMP1P54849 157 aa10.82□□□□□ -0.68
SMPDL3A-201ENST00000368440 RRN3P1Q2M238 152 aa10.82□□□□□ -0.68
SMPDL3A-201ENST00000368440 CMTM2Q8TAZ6 248 aa10.82□□□□□ -0.68
SMPDL3A-201ENST00000368440 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 TRAV12-3A0A0B4J271 114 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 RBAKDNA6NC62 111 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 KLLNB2CW77 178 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 AZU1P20160 251 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 ZNF138P52744 262 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 RPL23P62829 140 aaKnown RBP10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 GOLT1AQ6ZVE7 132 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 ZFAND2AQ8N6M9 145 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 LINC01587Q99440 93 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 EPDR1Q9UM22 224 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 CRISP2P16562 243 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 C2CD4CQ8TF44 421 aa10.81□□□□□ -0.68
SMPDL3A-201ENST00000368440 TENM2Q9NT68 2774 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 TRAV8-1A0A0A6YYK1 113 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 HTN1P15515 57 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 RHEBQ15382 184 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 CENPWQ5EE01 88 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 Q6ZQT7 251 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 C5orf17Q8NAS9 161 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 NHLRC2Q8NBF2 726 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
SMPDL3A-201ENST00000368440 C7orf71A4D174 169 aa10.79□□□□□ -0.68
SMPDL3A-201ENST00000368440 GNG4P50150 75 aa10.79□□□□□ -0.68
SMPDL3A-201ENST00000368440 PLAC8L1A1L4L8 177 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 H7BYZ3 331 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 TCRAP04437 139 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 GPX1P07203 203 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 RNASE4P34096 147 aaKnown RBP10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 TAS2R60P59551 318 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 ARL6IP6Q8N6S5 226 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 UBE2G1P62253 170 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 FAM222AQ5U5X8 452 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 Q6ZTC4 211 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 LINC01551Q86U37 167 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 HIST1H2BAQ96A08 127 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
SMPDL3A-201ENST00000368440 ZNF324O75467 553 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms