RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 C18orf15Q96N68 181 aa13.86□□□□□ -0.19
UBQLN4-201ENST00000368309 SELENOKQ9Y6D0 94 aa13.86□□□□□ -0.19
UBQLN4-201ENST00000368309 ORAOV1Q8WV07 137 aa13.86□□□□□ -0.19
UBQLN4-201ENST00000368309 IGHV3-11P01762 117 aa13.86□□□□□ -0.19
UBQLN4-201ENST00000368309 ZNF738Q8NE65 137 aa13.86□□□□□ -0.19
UBQLN4-201ENST00000368309 CCL25O15444 150 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 ARL3P36405 182 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 ANKRD39Q53RE8 183 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 PTTG1IPP53801 180 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 SRSF2Q01130 221 aaKnown RBP13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 BVES-AS1Q5T3Y7 98 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 CNFNQ9BYD5 112 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 U3KQE9 123 aa13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 UTP20O75691 2785 aaKnown RBP13.85□□□□□ -0.19
UBQLN4-201ENST00000368309 SMAD7O15105 426 aaKnown RBP13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 IGF1P05019 195 aa13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 DEFB1P60022 68 aa13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 IFI27L1Q96BM0 104 aa13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 LCNL1Q6ZST4 164 aa13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 MAP1LC3AQ9H492 121 aa13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 USP9XQ93008 2570 aaPredicted RBP13.84□□□□□ -0.19
UBQLN4-201ENST00000368309 TNFRSF6BO95407 300 aa13.83□□□□□ -0.19
UBQLN4-201ENST00000368309 COX8AP10176 69 aa13.83□□□□□ -0.19
UBQLN4-201ENST00000368309 C20orf173Q96LM9 149 aa13.83□□□□□ -0.19
UBQLN4-201ENST00000368309 CSMD2Q7Z408 3487 aa13.83□□□□□ -0.19
UBQLN4-201ENST00000368309 CCL19Q99731 98 aa13.83□□□□□ -0.2
UBQLN4-201ENST00000368309 PIMREGQ9BSJ6 248 aa13.83□□□□□ -0.2
UBQLN4-201ENST00000368309 IGKV3-7A0A075B6H7 116 aa13.83□□□□□ -0.2
UBQLN4-201ENST00000368309 KLK15Q9H2R5 256 aa13.83□□□□□ -0.2
UBQLN4-201ENST00000368309 BLCAPP62952 87 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 HIST1H1AQ02539 215 aaPredicted RBP13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 C19orf54Q5BKX5 351 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 Q6ZS46 218 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 H3BUX3 64 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 SPRY2O43597 315 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 LEPP41159 167 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 DKK2Q9UBU2 259 aa13.82□□□□□ -0.2
UBQLN4-201ENST00000368309 TRAV26-2A0A0B4J265 109 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 FAM223BA6NKX1 122 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 RPL11P62913 178 aaKnown RBP13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 PRR9Q5T870 116 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 FAM223AQ8IWN6 122 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 UFC1Q9Y3C8 167 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 PPBPP02775 128 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 LGALS9BQ3B8N2 356 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 LGALS9CQ6DKI2 356 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 C9orf47Q6ZRZ4 202 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 GLMPQ8WWB7 406 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 IGHV4-30-2A0A087WSY4 118 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 C12orf54Q6X4T0 127 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 C2orf91Q6ZV80 131 aa13.81□□□□□ -0.2
UBQLN4-201ENST00000368309 FOSL1P15407 271 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 ATP5J2P56134 94 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 IGHV7-4-1A0A0J9YVY3 117 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 C10orf105Q8TEF2 133 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 MYO18BQ8IUG5 2567 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 USP9YO00507 2555 aaPredicted RBP13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 CBY3A6NI87 242 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 MEGF9Q9H1U4 602 aa13.8□□□□□ -0.2
UBQLN4-201ENST00000368309 TAX1BP3O14907 124 aa13.79□□□□□ -0.2
UBQLN4-201ENST00000368309 PF4V1P10720 104 aa13.79□□□□□ -0.2
UBQLN4-201ENST00000368309 UBE2V1Q13404 147 aa13.79□□□□□ -0.2
UBQLN4-201ENST00000368309 VAMP3Q15836 100 aa13.79□□□□□ -0.2
UBQLN4-201ENST00000368309 SPANXN1Q5VSR9 72 aa13.79□□□□□ -0.2
UBQLN4-201ENST00000368309 GPHB5Q86YW7 130 aa13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 MRPL53Q96EL3 112 aaKnown RBP13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 H3BVH4 76 aa13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 IGSF10Q6WRI0 2623 aa13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 CLEC2AQ6UVW9 174 aa13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 CENPEQ02224 2701 aa13.78□□□□□ -0.2
UBQLN4-201ENST00000368309 FGF6P10767 208 aa13.77□□□□□ -0.2
UBQLN4-201ENST00000368309 DOPEY1Q5JWR5 2465 aa13.77□□□□□ -0.2
UBQLN4-201ENST00000368309 DEFB125Q8N687 156 aa13.77□□□□□ -0.21
UBQLN4-201ENST00000368309 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
UBQLN4-201ENST00000368309 OR2K2Q8NGT1 345 aa13.77□□□□□ -0.21
UBQLN4-201ENST00000368309 F6UB75 175 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 PRSS1P07477 247 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 FCER1GP30273 86 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 NMUP48645 174 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 TMEM158Q8WZ71 300 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 NXT2Q9NPJ8 142 aaKnown RBP13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 CRIP2P52943 208 aaPredicted RBP13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 C9orf139Q6ZV77 190 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 IGHG2P01859 326 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 SRD5A1P18405 259 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 OR4X2Q8NGF9 303 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 NRGNQ92686 78 aa13.76□□□□□ -0.21
UBQLN4-201ENST00000368309 POLQO75417 2590 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 NDUFA4O00483 81 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 AVPP01185 164 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 KIR3DS1Q14943 382 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 TM4SF20Q53R12 229 aa13.75□□□□□ -0.21
UBQLN4-201ENST00000368309 ACACBO00763 2458 aa13.74□□□□□ -0.21
UBQLN4-201ENST00000368309 A6NDX4 124 aa13.74□□□□□ -0.21
UBQLN4-201ENST00000368309 OR10J6PQ8NGY7 276 aa13.74□□□□□ -0.21
UBQLN4-201ENST00000368309 NPFFR1Q9GZQ6 430 aa13.74□□□□□ -0.21
UBQLN4-201ENST00000368309 M0R381 172 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms