RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 HIST1H1AQ02539 215 aaPredicted RBP9.25□□□□□ -0.93
USF1-203ENST00000368021 PDE6HQ13956 83 aa9.25□□□□□ -0.93
USF1-203ENST00000368021 GPR82Q96P67 336 aa9.25□□□□□ -0.93
USF1-203ENST00000368021 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
USF1-203ENST00000368021 ZNF207O43670 478 aaKnown RBP9.24□□□□□ -0.93
USF1-203ENST00000368021 LGALS1P09382 135 aaKnown RBP9.24□□□□□ -0.93
USF1-203ENST00000368021 NPPCP23582 126 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 OR10G8Q8NGN5 311 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 WIPF2Q8TF74 440 aaPredicted RBP9.24□□□□□ -0.93
USF1-203ENST00000368021 ZNF479Q96JC4 524 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 IL36BQ9NZH7 164 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 U3KQE9 123 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 TRRAPQ9Y4A5 3859 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 TRBV19A0A075B6N1 114 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 SCO2A0A1W2PP80 73 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 TMEM189A5PLL7 270 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 NDUFB4O95168 129 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 NUDT3O95989 172 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 HLA-DQA1P01909 254 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 GPHB5Q86YW7 130 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 LYPD1Q8N2G4 141 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 SPATA3Q8NHX4 192 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 BLNKQ8WV28 456 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 WFDC12Q8WWY7 111 aa9.24□□□□□ -0.93
USF1-203ENST00000368021 IGHV3OR16-8A0A075B7F1 116 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 NDUFA7O95182 113 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 CKS1BP61024 79 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 BVES-AS1Q5T3Y7 98 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 AMMECR1LQ6DCA0 310 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 UFSP1Q6NVU6 142 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
USF1-203ENST00000368021 HAX1O00165 279 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 FAM106AQ4KMX7 169 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 PSMG4Q5JS54 123 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 UNQ9165/PRO28630Q6UXU0 137 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 C3orf56Q8N813 242 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 C5orf17Q8NAS9 161 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
USF1-203ENST00000368021 H3BRM9 83 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 K7EMT4 169 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 SLC17A3O00476 420 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 GNG4P50150 75 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 PSG9Q00887 426 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 CD300EQ496F6 205 aaPredicted RBP9.21□□□□□ -0.93
USF1-203ENST00000368021 LINC01006Q8NI28 216 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 Q9H3A6 140 aa9.21□□□□□ -0.93
USF1-203ENST00000368021 DAZ1Q9NQZ3 744 aaKnown RBP9.21□□□□□ -0.93
USF1-203ENST00000368021 A0A087X0K7 114 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 A0A1W2PS18 150 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 PGPA6NDG6 321 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 K7EP34 96 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 RPEL1Q2QD12 228 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 C4orf3Q8WVX3 66 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 DERL1Q9BUN8 251 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.94
USF1-203ENST00000368021 C9JCJ5 164 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 NUPR1O60356 82 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 APOHP02749 345 aaPredicted RBP9.2□□□□□ -0.94
USF1-203ENST00000368021 PMCHP20382 165 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 HSD52Q0P140 79 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 SLAQ13239 276 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 SIGLEC15Q6ZMC9 328 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 EPDR1Q9UM22 224 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 SMAD5-AS1Q9Y6J3 95 aa9.2□□□□□ -0.94
USF1-203ENST00000368021 HELTA6NFD8 242 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 H3BTX0 84 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 LGALS9O00182 355 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 PEX7O00628 323 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
USF1-203ENST00000368021 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 C17orf77Q96MU5 243 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 CITED2Q99967 270 aaPredicted RBP9.19□□□□□ -0.94
USF1-203ENST00000368021 SPATA25Q9BR10 227 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 TMEM191AQ9H0A3 160 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 UFC1Q9Y3C8 167 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 TRBV20OR9-2A0A075B6H5 130 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 IGHV4OR15-8A0A075B7B6 117 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 A0A087WW49 117 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 C9orf118A6NHY6 69 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 CRXO43186 299 aaPredicted RBP9.19□□□□□ -0.94
USF1-203ENST00000368021 AZU1P20160 251 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 CRYBA4P53673 196 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 LINC00310P59036 64 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 UBE2G1P62253 170 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 OR1N2Q8NGR9 330 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 GLMPQ8WWB7 406 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 VCX2Q9H322 139 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
USF1-203ENST00000368021 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
USF1-203ENST00000368021 HIST2H2BDQ6DRA6 164 aa9.18□□□□□ -0.94
USF1-203ENST00000368021 EXOC3-AS1Q8N2X6 119 aa9.18□□□□□ -0.94
USF1-203ENST00000368021 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
USF1-203ENST00000368021 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 TRAV34A0A0B4J273 112 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 IGHV3-66A0A0C4DH42 116 aa9.17□□□□□ -0.94
USF1-203ENST00000368021 TSPAN13O95857 204 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms