RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LY6LH3BQJ8 138 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 MFAP4P55083 255 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 LCNL1Q6ZST4 164 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 LINC01560Q8TB33 94 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 TRAV40A0A0B4J280 105 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
PRKN-205ENST00000366897 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
PRKN-205ENST00000366897 KLRB1Q12918 225 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 PDE6HQ13956 83 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 IL17RELQ6ZVW7 336 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 SIVA1O15304 175 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 FCER1GP30273 86 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 AMTNQ6UX39 209 aa10.53□□□□□ -0.72
PRKN-205ENST00000366897 IGLV11-55A0A075B6I3 123 aa10.52□□□□□ -0.72
PRKN-205ENST00000366897 IGKCP01834 107 aa10.52□□□□□ -0.72
PRKN-205ENST00000366897 CFHR4Q92496 578 aa10.52□□□□□ -0.72
PRKN-205ENST00000366897 MRPL35Q9NZE8 188 aaKnown RBP10.52□□□□□ -0.72
PRKN-205ENST00000366897 UFC1Q9Y3C8 167 aa10.52□□□□□ -0.72
PRKN-205ENST00000366897 RPL7P18124 248 aaKnown RBP10.52□□□□□ -0.73
PRKN-205ENST00000366897 EFNA4P52798 201 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 WFDC2Q14508 124 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 DTX2Q86UW9 622 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 RAB1BQ9H0U4 201 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.73
PRKN-205ENST00000366897 GRNP28799 593 aaKnown RBP10.51□□□□□ -0.73
PRKN-205ENST00000366897 KLK15Q9H2R5 256 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 DPM3Q9P2X0 92 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
PRKN-205ENST00000366897 J3KRW8 73 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 BMI1P35226 326 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 ARPC1AQ92747 370 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 CTSGP08311 255 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 SMIM17P0DL12 118 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 SMAGPQ0VAQ4 97 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
PRKN-205ENST00000366897 FLNCQ14315 2725 aa10.5□□□□□ -0.73
PRKN-205ENST00000366897 ZFHX3Q15911 3703 aa10.5□□□□□ -0.73
PRKN-205ENST00000366897 J3QKU1 62 aa10.5□□□□□ -0.73
PRKN-205ENST00000366897 NDUFA3O95167 84 aa10.5□□□□□ -0.73
PRKN-205ENST00000366897 SPTAN1Q13813 2472 aaKnown RBP10.5□□□□□ -0.73
PRKN-205ENST00000366897 PHLDA1Q8WV24 401 aaPredicted RBP10.5□□□□□ -0.73
PRKN-205ENST00000366897 IGKV3D-20A0A0C4DH25 116 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 FABP5P3A8MUU1 101 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 H3BMG7 143 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 ZNF672Q499Z4 452 aaPredicted RBP10.49□□□□□ -0.73
PRKN-205ENST00000366897 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 UBR5O95071 2799 aaPredicted RBP10.49□□□□□ -0.73
PRKN-205ENST00000366897 MAP1AP78559 2803 aaPredicted RBP10.49□□□□□ -0.73
PRKN-205ENST00000366897 DPM2O94777 84 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 Q8NA96 180 aa10.49□□□□□ -0.73
PRKN-205ENST00000366897 CD3EP07766 207 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 CLEC2AQ6UVW9 174 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 ZMAT4Q9H898 229 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 CEND1Q8N111 149 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
PRKN-205ENST00000366897 TSSC4Q9Y5U2 329 aaPredicted RBP10.48□□□□□ -0.73
PRKN-205ENST00000366897 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.48□□□□□ -0.73
PRKN-205ENST00000366897 AZU1P20160 251 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 ETDBQ3ZM63 59 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 SAMD13Q5VXD3 122 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 SFTA2Q6UW10 78 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 PSMG3-AS1Q96PY0 264 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 RNF5Q99942 180 aa10.48□□□□□ -0.73
PRKN-205ENST00000366897 FAM90A27PA6NNH2 459 aa10.47□□□□□ -0.73
PRKN-205ENST00000366897 B9A039 149 aa10.47□□□□□ -0.73
PRKN-205ENST00000366897 ECSCRQ19T08 205 aa10.47□□□□□ -0.73
PRKN-205ENST00000366897 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
PRKN-205ENST00000366897 IGLL5B9A064 214 aa10.46□□□□□ -0.73
PRKN-205ENST00000366897 INSL3P51460 131 aa10.46□□□□□ -0.73
PRKN-205ENST00000366897 ZNF479Q96JC4 524 aa10.46□□□□□ -0.73
PRKN-205ENST00000366897 AGPAT4-IT1Q9H0P7 198 aa10.46□□□□□ -0.73
PRKN-205ENST00000366897 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.74
PRKN-205ENST00000366897 TMEM238LA0A1B0GVL6 79 aa10.46□□□□□ -0.74
PRKN-205ENST00000366897 NPBQ8NG41 125 aa10.46□□□□□ -0.74
PRKN-205ENST00000366897 CLEC3BP05452 202 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 C15orf32Q32M92 178 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 COX8CQ7Z4L0 72 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 S100A7AQ86SG5 101 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 HIST1H4GQ99525 98 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 HIGD1BQ9P298 99 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 IGF1P05019 195 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 DEFB1P60022 68 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 Q8N8P6 123 aa10.45□□□□□ -0.74
PRKN-205ENST00000366897 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 H3BVH4 76 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 C12orf74Q32Q52 190 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 MYOZ3Q8TDC0 251 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 LINC01559Q495D7 138 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 TTC9CQ8N5M4 171 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 NRACQ8N912 160 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 TM2D2Q9BX73 214 aa10.44□□□□□ -0.74
PRKN-205ENST00000366897 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
PRKN-205ENST00000366897 FLNBO75369 2602 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms