RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SAPCD1Q5SSQ6 148 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 Q6ZN92 141 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 STHQ8IWL8 128 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 MRPS16Q9Y3D3 137 aaKnown RBP5.6□□□□□ -1.51
CLCN3-202ENST00000360642 U3KQK5 164 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 IGKV2-40A0A087WW87 121 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-202ENST00000360642 IGKV2D-40P01614 121 aaPredicted RBP5.6□□□□□ -1.51
CLCN3-202ENST00000360642 C15orf32Q32M92 178 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 Q5PR19 223 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 LAMTOR2Q9Y2Q5 125 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 HIVEP3Q5T1R4 2406 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-202ENST00000360642 SAA4P35542 130 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
CLCN3-202ENST00000360642 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 LYZL1Q6UWQ5 148 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 TMEM208Q9BTX3 173 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 UBTD1Q9HAC8 227 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 SPG11Q96JI7 2443 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 ITPR1Q14643 2758 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 A0A087X0K7 114 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 CENPVL3A0A0U1RRI6 287 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 TMEM189A5PLL7 270 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 OR4C46A6NHA9 309 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 INAFM1C9JVW0 142 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 ATP6V0E1O15342 81 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 BUB3O43684 328 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF80P51504 273 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-202ENST00000360642 RELQ04864 619 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-202ENST00000360642 GAGE1Q13065 139 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 LY6DQ14210 128 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 UNQ5815/PRO19632Q6UWF5 114 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 ITLN2Q8WWU7 325 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-202ENST00000360642 VGLL1Q99990 258 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 TP73-AS1Q9UF72 201 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 CUBNO60494 3623 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 CRYBG3Q68DQ2 2970 aa5.59□□□□□ -1.51
CLCN3-202ENST00000360642 CLPSL1A2RUU4 121 aa5.59□□□□□ -1.52
CLCN3-202ENST00000360642 G0S2P27469 103 aa5.59□□□□□ -1.52
CLCN3-202ENST00000360642 S100A7P31151 101 aa5.59□□□□□ -1.52
CLCN3-202ENST00000360642 STPG4Q8N801 248 aa5.59□□□□□ -1.52
CLCN3-202ENST00000360642 BPESC1Q9GZL8 116 aa5.59□□□□□ -1.52
CLCN3-202ENST00000360642 LINC01548A6NM66 108 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 DLEU1O43261 78 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 HLA-DMBP28068 263 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 GPR183P32249 361 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 RHOGP84095 191 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 BATFQ16520 125 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 FAM104BQ5XKR9 115 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 PRORYQ9H606 182 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 TIMM8BQ9Y5J9 83 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-202ENST00000360642 MUC21A0A0G2JKD1 596 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 MUC21A0A140T8X8 626 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 TMEM213A2RRL7 107 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 C19orf84I3L1E1 186 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 IGLC6P0CF74 106 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 RAB9AP51151 201 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 ECSCRQ19T08 205 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 MUC21Q5SSG8 566 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 TPPP3Q9BW30 176 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 MAP1LC3CQ9BXW4 147 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 CELSR2Q9HCU4 2923 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 HSPB8Q9UJY1 196 aa5.58□□□□□ -1.52
CLCN3-202ENST00000360642 UTP20O75691 2785 aaKnown RBP5.57□□□□□ -1.52
CLCN3-202ENST00000360642 G3V318 75 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 NPFFO15130 113 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 SFTPCP11686 197 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 TFPI2P48307 235 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 LINC01545Q5VT33 79 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 Q8TAT8 98 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 MCRIP2Q9BUT9 160 aaKnown RBP5.57□□□□□ -1.52
CLCN3-202ENST00000360642 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 A0A096LNJ9 63 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 RBAKDNA6NC62 111 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 D6R8Y8 96 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 BMI1P35226 326 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 RPS20P60866 119 aaKnown RBP5.57□□□□□ -1.52
CLCN3-202ENST00000360642 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 C5orf56Q8N8D9 126 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 ZNF747Q9BV97 191 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 CNFNQ9BYD5 112 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 IFI27P40305 119 aaPredicted RBP5.57□□□□□ -1.52
CLCN3-202ENST00000360642 PAX8Q06710 450 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 FAM106AQ4KMX7 169 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 AMN1Q8IY45 258 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 MRPL53Q96EL3 112 aaKnown RBP5.57□□□□□ -1.52
CLCN3-202ENST00000360642 TMEM191AQ9H0A3 160 aa5.57□□□□□ -1.52
CLCN3-202ENST00000360642 TRBV7-1A0A0A6YYK4 115 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 PRAC2D3DTV9 90 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 MRPL51Q4U2R6 128 aaKnown RBP5.56□□□□□ -1.52
CLCN3-202ENST00000360642 ORMDL3Q8N138 153 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 PRSS3P2Q8NHM4 247 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 SIGLEC8Q9NYZ4 499 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 UQCRFS1P47985 274 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 LOXL1Q08397 574 aaPredicted RBP5.56□□□□□ -1.52
CLCN3-202ENST00000360642 CLEC19AQ6UXS0 136 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 Q75L30 129 aa5.56□□□□□ -1.52
CLCN3-202ENST00000360642 FA2HQ7L5A8 372 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms