RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TMEM14BQ9NUH8 114 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 IGLL1P15814 213 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 MED13Q9UHV7 2174 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 TRAV3A0A0B4J244 114 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 LINC00473A8K010 186 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 CACNA1GO43497 2377 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 TFF1P04155 84 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 TEN1Q86WV5 123 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 SAA4P35542 130 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 Q6ZVH6 145 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 RHOHQ15669 191 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 ZNF672Q499Z4 452 aaPredicted RBP7.5□□□□□ -1.21
VPS13A-203ENST00000360280 SIGLEC8Q9NYZ4 499 aa7.5□□□□□ -1.21
VPS13A-203ENST00000360280 TEX48A0A1B0GUV7 120 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 NCOA6Q14686 2063 aaPredicted RBP7.49□□□□□ -1.21
VPS13A-203ENST00000360280 CSRP2Q16527 193 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 OVOL3O00110 214 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 ANGP03950 147 aaKnown RBP7.49□□□□□ -1.21
VPS13A-203ENST00000360280 IGKV1-27A0A075B6S5 117 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 FGFBP3Q8TAT2 258 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 NXPH4O95158 308 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 C12orf74Q32Q52 190 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 CFC1BP0CG36 223 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 CFC1P0CG37 223 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 NTN5Q8WTR8 489 aaPredicted RBP7.49□□□□□ -1.21
VPS13A-203ENST00000360280 DSCAML1Q8TD84 2053 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 PLCE1Q9P212 2302 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 ADCYAP1P18509 176 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 ZFP2Q6ZN57 461 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 IGHV1OR15-1A0A075B7D0 117 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 A0A0B4J2C4 111 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 PAX9P55771 341 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 TNCP24821 2201 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 IGLV3-12A0A075B6K2 115 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 IGKV1-16P04430 117 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 V9GYV3 84 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 GATA3P23771 443 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 LINC00479Q96M42 142 aa7.49□□□□□ -1.21
VPS13A-203ENST00000360280 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 RS1O15537 224 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 CD177Q8N6Q3 437 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 TRAV26-2A0A0B4J265 109 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 YPEL3P61236 119 aaPredicted RBP7.48□□□□□ -1.21
VPS13A-203ENST00000360280 ZNRF2Q8NHG8 242 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 ADAMTS9Q9P2N4 1935 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 PSPNO60542 156 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 CYYR1Q96J86 154 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 TRBV19A0A075B6N1 114 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 PRR25Q96S07 402 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 XCL2Q9UBD3 114 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 TGFBR3LH3BV60 316 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 CLPSP04118 112 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 LINC01356Q8N9X3 169 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 H0YGX0 51 aa7.48□□□□□ -1.21
VPS13A-203ENST00000360280 LYNX1G3V0Z9 82 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 LYNX1P0DP58 116 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 HIGD2BQ4VC39 106 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 LINC01619G3V211 115 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 KLK9Q9UKQ9 250 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 CACNA1EQ15878 2313 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 CFHR3Q02985 330 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 FOXI2Q6ZQN5 318 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 DEFB105AQ8NG35 78 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 DKK4Q9UBT3 224 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 EXPH5Q8NEV8 1989 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 K7ERS5 55 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 C8orf86Q6ZUL3 223 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 NDUFA4L2Q9NRX3 87 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 IGHV3-16A0A0C4DH30 117 aa7.47□□□□□ -1.21
VPS13A-203ENST00000360280 A0A1B0GUS0 222 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 NREPQ16612 68 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 AMTNQ6UX39 209 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 DEFB131AP59861 70 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 MESP1Q9BRJ9 268 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 ICOSQ9Y6W8 199 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 ALPK3Q96L96 1907 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 IGHV2-70DA0A0C4DH43 119 aa7.46□□□□□ -1.21
VPS13A-203ENST00000360280 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 GGNQ86UU5 652 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 A0A087WV48 116 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV1-12A0A0C4DH73 117 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 IGKV1D-12P01611 117 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 C10orf91Q5T1B1 145 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
VPS13A-203ENST00000360280 C9JQL5 133 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 CR1LQ2VPA4 569 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 SPANXB1Q9NS25 103 aaPredicted RBP7.45□□□□□ -1.22
VPS13A-203ENST00000360280 MRPL53Q96EL3 112 aaKnown RBP7.45□□□□□ -1.22
VPS13A-203ENST00000360280 DYNAPQ8N1N2 210 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 LINC01620Q4KN68 170 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 MST1P26927 711 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 QRFPP83859 136 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
VPS13A-203ENST00000360280 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
VPS13A-203ENST00000360280 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms