RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ATXN8Q156A1 80 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 FAM120AOSQ5T036 256 aa3.84□□□□□ -1.79
SCN3A-202ENST00000360093 SPAG8Q99932 426 aaPredicted RBP3.84□□□□□ -1.79
SCN3A-202ENST00000360093 TSPAN13O95857 204 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 DEFB130BP0DP73 79 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 DEFB130AP0DP74 79 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 DIAPH2-AS1Q14236 149 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 LRRC75A-AS1Q8N1F1 130 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 COL4A3Q01955 1670 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 A0A087WWL8 130 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 A0A1B0GV90 55 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.8
SCN3A-202ENST00000360093 C1orf159Q96HA4 380 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 V9GYV3 84 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 MED13LQ71F56 2210 aa3.84□□□□□ -1.8
SCN3A-202ENST00000360093 FAM208BQ5VWN6 2430 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGLV11-55A0A075B6I3 123 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGFL4Q6B9Z1 124 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 C8orf49Q96NF6 230 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV4-30-2A0A087WSY4 118 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 LTAP01374 205 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 PLA2G5P39877 138 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 LYPD6BQ8NI32 183 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 CST9LQ9H4G1 147 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV25A0A0B4J276 109 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV3-53P01767 116 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV4-59P01825 116 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 PMVKQ15126 192 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 BOD1L2Q8IYS8 172 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 Q8NA96 180 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV7-81A0A0B4J1V7 117 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 GUSBP1Q15486 140 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 ZNF726P1Q15940 193 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 CREBBPQ92793 2442 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 K7EMT4 169 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 PAX4O43316 350 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV4-39P01824 125 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 CRYGCP07315 174 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 ADCYAP1P18509 176 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 SH2D6Q7Z4S9 175 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 C5orf56Q8N8D9 126 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 WIPF3A6NGB9 483 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 F5H768 121 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 H3BUT2 72 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 SFTA2Q6UW10 78 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 SAMD5Q5TGI4 173 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 ZNF479Q96JC4 524 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 DNAJC30Q96LL9 226 aa3.83□□□□□ -1.8
SCN3A-202ENST00000360093 ZNF48Q96MX3 618 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-202ENST00000360093 FGF23Q9GZV9 251 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-202ENST00000360093 I3L2K1 104 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 C3orf79P0CE67 100 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ESDP10768 282 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ANXA2RQ3ZCQ2 193 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 PTPRQQ9UMZ3 2332 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ZNF493Q6ZR52 646 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 PRIMA1Q86XR5 153 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 C18orf32Q8TCD1 76 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 SDHAF1A6NFY7 115 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 NDUFS7O75251 213 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 IGLV1-47P01700 117 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 LOXL1Q08397 574 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 RHOHQ15669 191 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 WIPF2Q8TF74 440 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 FNDC4Q9H6D8 234 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ANKHD1Q8IWZ3 2542 aaKnown RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ZNF561-AS1K7EIQ3 104 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 PRSS57Q6UWY2 283 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 CYYR1Q96J86 154 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 TP53TG1Q9Y2A0 90 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 Q8N9W7 124 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 HCFC1P51610 2035 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ZC2HC1BQ5TFG8 222 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 GPHB5Q86YW7 130 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 ZC2HC1AQ96GY0 325 aa3.82□□□□□ -1.8
SCN3A-202ENST00000360093 COL5A1P20908 1838 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV3-64A0A075B6Q5 118 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 EREGO14944 169 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 GAGE13Q4V321 117 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 KIAA1549Q9HCM3 1950 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 TRAV13-1A0A0B4J241 112 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 K7EIM0 57 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 IGHG2P01859 326 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 OTOGLQ3ZCN5 2332 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV1-24A0A0C4DH33 117 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 INSL3P51460 131 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 LGALS9BQ3B8N2 356 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 LGALS9CQ6DKI2 356 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 C16orf54Q6UWD8 224 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 CHAC1Q9BUX1 264 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 HERVK_113P63121 156 aa3.81□□□□□ -1.8
SCN3A-202ENST00000360093 SSBP2P81877 361 aaPredicted RBP3.81□□□□□ -1.8
SCN3A-202ENST00000360093 SPRNQ5BIV9 151 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms