RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 IGKV2D-24A0A075B6R9 120 aa12.76□□□□□ -0.37
COL18A1-203ENST00000359759 IGLV2-23P01705 113 aa12.76□□□□□ -0.37
COL18A1-203ENST00000359759 ZNF134P52741 427 aa12.76□□□□□ -0.37
COL18A1-203ENST00000359759 RPL18AQ02543 176 aaKnown RBP12.76□□□□□ -0.37
COL18A1-203ENST00000359759 KMT2EQ8IZD2 1858 aa12.76□□□□□ -0.37
COL18A1-203ENST00000359759 Q96MF0 132 aa12.76□□□□□ -0.37
COL18A1-203ENST00000359759 UBE2E1P51965 193 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-203ENST00000359759 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 C17orf58Q2M2W7 97 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 DOCK3Q8IZD9 2030 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 IGHV1-69DA0A0B4J2H0 117 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 IGHV1-69P01742 117 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 CDPF1Q6NVV7 123 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 ORMDL1Q9P0S3 153 aa12.75□□□□□ -0.37
COL18A1-203ENST00000359759 Q9HAA7 133 aa12.74□□□□□ -0.37
COL18A1-203ENST00000359759 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
COL18A1-203ENST00000359759 NRXN2Q9P2S2 1712 aa12.74□□□□□ -0.37
COL18A1-203ENST00000359759 K7EN84 100 aa12.74□□□□□ -0.37
COL18A1-203ENST00000359759 F6UB75 175 aa12.74□□□□□ -0.37
COL18A1-203ENST00000359759 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
COL18A1-203ENST00000359759 Q9H8V8 135 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 IGKV3D-7A0A0C4DH55 119 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 SH2D6Q7Z4S9 175 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 VOPP1Q96AW1 172 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 SCN10AQ9Y5Y9 1956 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 APOC4P55056 127 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 APC2O95996 2303 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 KIAA2026Q5HYC2 2103 aa12.73□□□□□ -0.37
COL18A1-203ENST00000359759 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
COL18A1-203ENST00000359759 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
COL18A1-203ENST00000359759 PHF3Q92576 2039 aaKnown RBP12.72□□□□□ -0.37
COL18A1-203ENST00000359759 FOXE3Q13461 319 aa12.72□□□□□ -0.37
COL18A1-203ENST00000359759 SP5Q6BEB4 398 aaPredicted RBP12.72□□□□□ -0.37
COL18A1-203ENST00000359759 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
COL18A1-203ENST00000359759 NDUFA4O00483 81 aa12.71□□□□□ -0.37
COL18A1-203ENST00000359759 CFC1BP0CG36 223 aa12.71□□□□□ -0.37
COL18A1-203ENST00000359759 CFC1P0CG37 223 aa12.71□□□□□ -0.37
COL18A1-203ENST00000359759 ANK1P16157 1881 aa12.71□□□□□ -0.37
COL18A1-203ENST00000359759 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.38
COL18A1-203ENST00000359759 MYO7BQ6PIF6 2116 aa12.71□□□□□ -0.38
COL18A1-203ENST00000359759 ADAMTS7Q9UKP4 1686 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 WT1-ASQ06250 92 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 IGHV2-70DA0A0C4DH43 119 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 IGHV2-5P01817 119 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 IGLC7A0M8Q6 106 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 C5orf38Q86SI9 138 aa12.7□□□□□ -0.38
COL18A1-203ENST00000359759 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
COL18A1-203ENST00000359759 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 U3KQE9 123 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 RMI2Q96E14 147 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 TMEM14CQ9P0S9 112 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 DYNAPQ8N1N2 210 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 TRAV4A0A0B4J268 109 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 FOXL2NBQ6ZUU3 175 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 DKK4Q9UBT3 224 aa12.69□□□□□ -0.38
COL18A1-203ENST00000359759 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 BAALCQ8WXS3 180 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 Q6ZR03 302 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 RTTNQ86VV8 2226 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 DOCK6Q96HP0 2047 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 BUB3O43684 328 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 SIVA1O15304 175 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 SPANXDQ9BXN6 97 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 C14orf132Q9NPU4 83 aa12.68□□□□□ -0.38
COL18A1-203ENST00000359759 IGLV10-54A0A075B6I4 117 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 IGHV7-4-1A0A0J9YVY3 117 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 FHL1Q13642 323 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 ZNF493Q6ZR52 646 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 SMIM20Q8N5G0 67 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 SCN5AQ14524 2016 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 SVIPQ8NHG7 77 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 RPL39LQ96EH5 51 aaKnown RBP12.67□□□□□ -0.38
COL18A1-203ENST00000359759 PYGO2Q9BRQ0 406 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 LTAP01374 205 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 TIMM17AQ99595 171 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 MYLKQ15746 1914 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 CEP290O15078 2479 aa12.67□□□□□ -0.38
COL18A1-203ENST00000359759 NCR3O14931 201 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 SPATA25Q9BR10 227 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 HEATR1Q9H583 2144 aaKnown RBP12.66□□□□□ -0.38
COL18A1-203ENST00000359759 CFPP27918 469 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 TET1Q8NFU7 2136 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 ZNF503-AS2A6NEH8 195 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 WISP1O95388 367 aa12.66□□□□□ -0.38
COL18A1-203ENST00000359759 APRG1Q8IVJ8 170 aa12.65□□□□□ -0.38
COL18A1-203ENST00000359759 C10orf91Q5T1B1 145 aa12.65□□□□□ -0.38
COL18A1-203ENST00000359759 A0A1B0GX51 115 aa12.65□□□□□ -0.38
COL18A1-203ENST00000359759 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
COL18A1-203ENST00000359759 DAND5Q8N907 189 aa12.65□□□□□ -0.38
COL18A1-203ENST00000359759 SDK2Q58EX2 2172 aa12.65□□□□□ -0.38
COL18A1-203ENST00000359759 DEFB136Q30KP8 78 aa12.65□□□□□ -0.39
COL18A1-203ENST00000359759 ETDCA0A1B0GVM5 59 aa12.64□□□□□ -0.39
COL18A1-203ENST00000359759 PI4KAP42356 2102 aa12.64□□□□□ -0.39
COL18A1-203ENST00000359759 CR1LQ2VPA4 569 aa12.64□□□□□ -0.39
COL18A1-203ENST00000359759 TEX48A0A1B0GUV7 120 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms