RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 TREM1Q9NP99 234 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 XCL2Q9UBD3 114 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 EREGO14944 169 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 UQCC3Q6UW78 93 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 Q6ZWC4 215 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 COMMD7Q86VX2 200 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 BAGE2Q86Y30 109 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 MLST8Q9BVC4 326 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 PARLQ9H300 379 aa9.05□□□□□ -0.96
NIF3L1-201ENST00000359683 TRBV20OR9-2A0A075B6H5 130 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 TRAV12-2A0A075B6T6 113 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 GPX1P07203 203 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 PRR9Q5T870 116 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 GFI1BQ5VTD9 330 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 TMEM183AQ8IXX5 376 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 C8orf49Q96NF6 230 aa9.04□□□□□ -0.96
NIF3L1-201ENST00000359683 C7orf71A4D174 169 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 C9JCJ5 164 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 J3KRW8 73 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 CEBPGP53567 150 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 SMUG1Q53HV7 270 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 CENPWQ5EE01 88 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
NIF3L1-201ENST00000359683 ZNF324O75467 553 aaPredicted RBP9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 IGLV2-8P01709 118 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 RNASE4P34096 147 aaKnown RBP9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 BTN1A1Q13410 526 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 ZNF674Q2M3X9 581 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 FAM74A3Q4VXF1 159 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 Q6AWC8 147 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 C1orf158Q8N1D5 194 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 SMIM12Q96EX1 92 aa9.02□□□□□ -0.96
NIF3L1-201ENST00000359683 TRAV12-3A0A0B4J271 114 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 ZNF727A8MUV8 499 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 INSP01308 110 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 RBMY1A1P0DJD3 496 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 RBMY1CP0DJD4 496 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 GNG4P50150 75 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 ZNF80P51504 273 aaPredicted RBP9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 RBMY1FQ15415 496 aaKnown RBP9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 SOHLH1Q5JUK2 328 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 RNF183Q96D59 192 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 B9D2Q9BPU9 175 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 SMIM7Q9BQ49 75 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 TP53TG1Q9Y2A0 90 aa9.02□□□□□ -0.97
NIF3L1-201ENST00000359683 GCGP01275 180 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 CRIP1P50238 77 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 DEFB135Q30KP9 77 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 ZNF705AQ6ZN79 300 aaPredicted RBP9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 NHLRC2Q8NBF2 726 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 OCC1Q8TAD7 63 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 RCHY1Q96PM5 261 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 TM2D3Q9BRN9 247 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 LY96Q9Y6Y9 160 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
NIF3L1-201ENST00000359683 PGPEP1LA6NFU8 196 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 SPRY2O43597 315 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 SFTA3P0C7M3 94 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 Q6ZQT7 251 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 TMEM256Q8N2U0 113 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 OVOL2Q9BRP0 275 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 NIPSNAP3BQ9BS92 247 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 GOLT1BQ9Y3E0 138 aa9□□□□□ -0.97
NIF3L1-201ENST00000359683 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
NIF3L1-201ENST00000359683 TMEM218A2RU14 115 aa8.99□□□□□ -0.97
NIF3L1-201ENST00000359683 PFN1P07737 140 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-201ENST00000359683 TMEM241Q24JQ0 296 aa8.99□□□□□ -0.97
NIF3L1-201ENST00000359683 PGPEP1Q9NXJ5 209 aa8.99□□□□□ -0.97
NIF3L1-201ENST00000359683 H7BYZ3 331 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 FAM162BQ5T6X4 162 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 LINC01587Q99440 93 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 NEU1Q99519 415 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 SPATA25Q9BR10 227 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 PYGO2Q9BRQ0 406 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 LINC00467Q9BRT7 94 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 K7EN84 100 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 MGST1P10620 155 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 LINC01551Q86U37 167 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 TMEM208Q9BTX3 173 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 BIN3Q9NQY0 253 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 C11orf21Q9P2W6 132 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 NAT8Q9UHE5 227 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 X6R8D5 127 aa8.98□□□□□ -0.97
NIF3L1-201ENST00000359683 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 SMIM9A6NGZ8 99 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 SH2D1AO60880 128 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 OR5I1Q13606 314 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 NDUFA5Q16718 116 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 TDRG1Q3Y452 100 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 OR11H2Q8NH07 326 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 SDF2L1Q9HCN8 221 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 RETNQ9HD89 108 aa8.97□□□□□ -0.97
NIF3L1-201ENST00000359683 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.97
NIF3L1-201ENST00000359683 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
NIF3L1-201ENST00000359683 C19orf71A6NCJ1 209 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms