RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-203ENST00000359265 TRAV9-1A0A075B6T8 112 aa10.35□□□□□ -0.75
PDLIM5-203ENST00000359265 COLCA2A8K830 154 aa10.35□□□□□ -0.75
PDLIM5-203ENST00000359265 CT83Q5H943 113 aa10.35□□□□□ -0.75
PDLIM5-203ENST00000359265 LINC00482Q8N8I6 264 aa10.35□□□□□ -0.75
PDLIM5-203ENST00000359265 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
PDLIM5-203ENST00000359265 TRBV7-9A0A0J9YWB2 115 aa10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 ZNF705DP0CH99 300 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 ZNF705BP0CI00 300 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 EBLN2Q6P2I7 272 aa10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 LINC00322Q6ZN03 302 aaPredicted RBP10.34□□□□□ -0.75
PDLIM5-203ENST00000359265 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 A0A1W2PPQ1 181 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 F6UB75 175 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 SH2D1AO60880 128 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 DUSP14O95147 198 aaKnown RBP10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 DEFB1P60022 68 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 FOXI2Q6ZQN5 318 aa10.33□□□□□ -0.76
PDLIM5-203ENST00000359265 TGIF2-C20orf24A0A0A6YYL0 155 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 A0A0J9YX75 114 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 A8MWL6 223 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 CXCL1P09341 107 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 RAB5AP20339 215 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 DEFB131AP59861 70 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 RPL19P84098 196 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 OR2D3Q8NGH3 330 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 TSKUQ8WUA8 353 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 FAM210BQ96KR6 192 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 ODF3Q96PU9 254 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 PYGO2Q9BRQ0 406 aa10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 MCRIP2Q9BUT9 160 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 SAV1Q9H4B6 383 aaPredicted RBP10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 EPPK1P58107 5090 aaKnown RBP10.32□□□□□ -0.76
PDLIM5-203ENST00000359265 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 FABP5P3A8MUU1 101 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 CD33P20138 364 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 LEPP41159 167 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 CRIP1P50238 77 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 INSL3P51460 131 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 FAM3BP58499 235 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 FAM19A4Q96LR4 140 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
PDLIM5-203ENST00000359265 XKRY2A2RUG3 117 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 TMEM189A5PLL7 270 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 IZUMO1RA6ND01 250 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 CA1P00915 261 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 CRISP2P16562 243 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 CMC4P56277 68 aaPredicted RBP10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 TCL1AP56279 114 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 RPS20P60866 119 aaKnown RBP10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 GDF5OSQ5U4N7 250 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 ZFAND2AQ8N6M9 145 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 NAT8BQ9UHF3 227 aa10.3□□□□□ -0.76
PDLIM5-203ENST00000359265 FAM231BA6NCW3 169 aa10.29□□□□□ -0.76
PDLIM5-203ENST00000359265 GPX1P07203 203 aa10.29□□□□□ -0.76
PDLIM5-203ENST00000359265 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
PDLIM5-203ENST00000359265 C9orf66Q5T8R8 295 aa10.29□□□□□ -0.76
PDLIM5-203ENST00000359265 TYMSP04818 313 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 HLA-DRB4P13762 266 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 TSPOP30536 169 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 LINC01559Q495D7 138 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 NEU1Q99519 415 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 TMA7Q9Y2S6 64 aaKnown RBP10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 HLA-DRB4X5D2U9 266 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 AGRNO00468 2067 aa10.28□□□□□ -0.76
PDLIM5-203ENST00000359265 TRAV21A0A0B4J279 112 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 KNCNA6PVL3 124 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 A8MTW9 85 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 HIGD1CA8MV81 97 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 KLLNB2CW77 178 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 OR11H12B2RN74 326 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 J3KRW8 73 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 ORM1P02763 201 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 ODF3L2Q3SX64 289 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 COX19Q49B96 90 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 ACTL10Q5JWF8 245 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 PRR9Q5T870 116 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 Q6AWC8 147 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 WFDC9Q8NEX5 89 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 SRD5A3Q9H8P0 318 aa10.27□□□□□ -0.77
PDLIM5-203ENST00000359265 C1orf196B1AJZ1 125 aa10.26□□□□□ -0.77
PDLIM5-203ENST00000359265 IGKV3-20P01619 116 aa10.26□□□□□ -0.77
PDLIM5-203ENST00000359265 NUP35Q8NFH5 326 aa10.26□□□□□ -0.77
PDLIM5-203ENST00000359265 FAM110AQ9BQ89 295 aa10.26□□□□□ -0.77
PDLIM5-203ENST00000359265 TMSB15BA0A087X1C1 80 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 H3BMM0 161 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 GZMBP10144 247 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 RNASE4P34096 147 aaKnown RBP10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 ATP5L2Q7Z4Y8 100 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 GTSF1Q8WW33 167 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
PDLIM5-203ENST00000359265 SORL1Q92673 2214 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms