RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FOXC2Q99958 501 aa8.7□□□□□ -1.02
SSU72-202ENST00000359060 B4DSR2 109 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 MPV17L2Q567V2 206 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 FAM74A4Q5TZK3 123 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 DEFB104AQ8WTQ1 72 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 ST20Q9HBF5 79 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 TMEM160Q9NX00 188 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 PAX1P15863 534 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 AGPAT4-IT1Q9H0P7 198 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 IGHV4-30-2A0A087WSY4 118 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 BUB3O43684 328 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 ASIPP42127 132 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 SIGLEC8Q9NYZ4 499 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 ZNF462Q96JM2 2506 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 NPYP01303 97 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 BLCAPP62952 87 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 FAM159AQ6UWV7 190 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 TMEM190Q8WZ59 177 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 RAB37Q96AX2 223 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
SSU72-202ENST00000359060 SPRY2O43597 315 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 PPBPP02775 128 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 COTL1Q14019 142 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 RHPN1-AS1Q9BWJ2 59 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 EPG5Q9HCE0 2579 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 A0A087X0K7 114 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 IGLV2-11P01706 119 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 FAM223BA6NKX1 122 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 FAM223AQ8IWN6 122 aa8.68□□□□□ -1.02
SSU72-202ENST00000359060 CRIP1P50238 77 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 STPG4Q8N801 248 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 TRAV21A0A0B4J279 112 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 TACC2O95359 2948 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 DLEU1O43261 78 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 ZNF688P0C7X2 276 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 ZNF80P51504 273 aaPredicted RBP8.67□□□□□ -1.02
SSU72-202ENST00000359060 DEFB1P60022 68 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 PAX2Q02962 417 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 TMEM95Q3KNT9 176 aa8.67□□□□□ -1.02
SSU72-202ENST00000359060 NXT2Q9NPJ8 142 aaKnown RBP8.67□□□□□ -1.02
SSU72-202ENST00000359060 KALRNO60229 2985 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 TRAV8-6A0A0B4J262 113 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 GCSHP23434 173 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 FOXE3Q13461 319 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 Q6ZVH6 145 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 ABCA2Q9BZC7 2435 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 F6UB75 175 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
SSU72-202ENST00000359060 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
SSU72-202ENST00000359060 PRB1P04280 392 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 USMG5Q96IX5 58 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 CCDC140Q96MF4 163 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 C14orf178Q8N769 122 aaPredicted RBP8.65□□□□□ -1.02
SSU72-202ENST00000359060 NACAE9PAV3 2078 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 A6NDN8 102 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 NDUFS8O00217 210 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 OVOL1O14753 267 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 TRBV12-3P01733 135 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 CD7P09564 240 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 SNRPD3P62318 126 aaKnown RBP8.65□□□□□ -1.02
SSU72-202ENST00000359060 EBI3Q14213 229 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 TMEM158Q8WZ71 300 aa8.65□□□□□ -1.02
SSU72-202ENST00000359060 PSMG4Q5JS54 123 aa8.65□□□□□ -1.03
SSU72-202ENST00000359060 ZNF48Q96MX3 618 aaPredicted RBP8.65□□□□□ -1.03
SSU72-202ENST00000359060 Q8N6K4 173 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 NPIPB6E9PJ23 425 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 C10orf105Q8TEF2 133 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 TP73-AS1Q9UF72 201 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 NPSP0C0P6 89 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 LINC00477Q96M19 166 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 MS4A6AQ9H2W1 248 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
SSU72-202ENST00000359060 MRPS16Q9Y3D3 137 aaKnown RBP8.64□□□□□ -1.03
SSU72-202ENST00000359060 SMAD5-AS1Q9Y6J3 95 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 LRBAP50851 2863 aa8.64□□□□□ -1.03
SSU72-202ENST00000359060 SCGB3A1Q96QR1 104 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 PRORYQ9H606 182 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 ATP5LO75964 103 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 LOXL1Q08397 574 aaPredicted RBP8.63□□□□□ -1.03
SSU72-202ENST00000359060 UNQ9165/PRO28630Q6UXU0 137 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 SCGB1D4Q6XE38 83 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 OR2K2Q8NGT1 345 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 DYNLRB2Q8TF09 96 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 TRAV12-3A0A0B4J271 114 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 IGHV4-59P01825 116 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 NAA38Q9BRA0 125 aaKnown RBP8.63□□□□□ -1.03
SSU72-202ENST00000359060 PEF1Q9UBV8 284 aaKnown RBP8.63□□□□□ -1.03
SSU72-202ENST00000359060 DCHS1Q96JQ0 3298 aa8.63□□□□□ -1.03
SSU72-202ENST00000359060 NDUFA4O00483 81 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 SMAD7O15105 426 aaKnown RBP8.62□□□□□ -1.03
SSU72-202ENST00000359060 ZNF56Q15929 161 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 TRBV6-1A0A0K0K1D8 114 aa8.62□□□□□ -1.03
SSU72-202ENST00000359060 ZZEF1O43149 2961 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms