RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 NMUP48645 174 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 BOD1L2Q8IYS8 172 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 MRPL53Q96EL3 112 aaKnown RBP6.59□□□□□ -1.35
RFX3-202ENST00000358730 MOB4Q9Y3A3 225 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 TRAV41A0A0B4J266 112 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 C7orf71A4D174 169 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 UQCRFS1P47985 274 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 SEC11AP67812 179 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 C16orf92Q96LL3 132 aa6.59□□□□□ -1.35
RFX3-202ENST00000358730 SFTPCP11686 197 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 FCER1GP30273 86 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 SMIM15Q7Z3B0 74 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 NPFFR1Q9GZQ6 430 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 PEF1Q9UBV8 284 aaKnown RBP6.58□□□□□ -1.36
RFX3-202ENST00000358730 SPTAN1Q13813 2472 aaKnown RBP6.58□□□□□ -1.36
RFX3-202ENST00000358730 CELSR1Q9NYQ6 3014 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 A1L4Q6 167 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 LINC01546A6NGU7 62 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 C19orf84I3L1E1 186 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 K7EP13 123 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 BRD3OSQ6XYD6 125 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 Q6ZQT7 251 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 C9orf47Q6ZRZ4 202 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
RFX3-202ENST00000358730 HIF1ANQ9NWT6 349 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 U3KQE9 123 aa6.58□□□□□ -1.36
RFX3-202ENST00000358730 TRAV40A0A0B4J280 105 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 FAM223BA6NKX1 122 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 ARL3P36405 182 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 FAM223AQ8IWN6 122 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 OR9G4Q8NGQ1 327 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 TMEM158Q8WZ71 300 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 TRAV8-6A0A0B4J262 113 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 TRAV26-2A0A0B4J265 109 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 PRSS1P07477 247 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 ODF1Q14990 250 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 OR2K2Q8NGT1 345 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 COL25A1Q9BXS0 654 aaPredicted RBP6.57□□□□□ -1.36
RFX3-202ENST00000358730 H3BVH4 76 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 J3KRW8 73 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 IGHV4-39P01824 125 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 HSD52Q0P140 79 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 C9orf139Q6ZV77 190 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 Q8N8P6 123 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 ITPR1Q14643 2758 aa6.57□□□□□ -1.36
RFX3-202ENST00000358730 A6NDN8 102 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 TRBV12-3P01733 135 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 C19orf54Q5BKX5 351 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 PRR9Q5T870 116 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 UNQ9165/PRO28630Q6UXU0 137 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 C20orf173Q96LM9 149 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 FOXC2Q99958 501 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 VPS13CQ709C8 3753 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 IGHV1-69DA0A0B4J2H0 117 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 IGHV1-69P01742 117 aa6.56□□□□□ -1.36
RFX3-202ENST00000358730 IGLV2-18A0A075B6J9 118 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 SIVA1O15304 175 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 RBX1P62877 108 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 ADAMTSL5Q6ZMM2 481 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 NRACQ8N912 160 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 OR4X2Q8NGF9 303 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 PIFOQ8TCI5 191 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 AP1S3Q96PC3 154 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 ATP6V0BQ99437 205 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 IGKCP01834 107 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 IGF1P05019 195 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 GNLYP22749 145 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 KIR3DS1Q14943 382 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 LY6EQ16553 131 aa6.55□□□□□ -1.36
RFX3-202ENST00000358730 IGKV2D-26A0A0A0MRZ7 120 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 SMIM17P0DL12 118 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
RFX3-202ENST00000358730 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 IGHV4-61A0A0C4DH41 118 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 ATP5LO75964 103 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 IGHV3-11P01762 117 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 DEFB1P60022 68 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
RFX3-202ENST00000358730 LAGE3Q14657 143 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 C21orf62-AS1Q17RA5 79 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 GPHB5Q86YW7 130 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 OR10J6PQ8NGY7 276 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 PIMREGQ9BSJ6 248 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 TTTY13Q9BZ97 58 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 ZMAT4Q9H898 229 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 HHLA3Q9XRX5 114 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 LENEPQ9Y5L5 61 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 IGHV4-4A0A075B6R2 117 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 H3BRM9 83 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 M0R381 172 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 NDUFA4O00483 81 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 DPM2O94777 84 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
RFX3-202ENST00000358730 RNF151Q2KHN1 245 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms