RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 UBE2G1P62253 170 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 PRR9Q5T870 116 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 ZFAND2AQ8N6M9 145 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 C1QTNF4Q9BXJ3 329 aa10.84□□□□□ -0.67
CCNE1-202ENST00000357943 KLLNB2CW77 178 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 TSPOP30536 169 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 LEPP41159 167 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 TMEM183BQ1AE95 376 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 Q6ZWC4 215 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 FMC1Q96HJ9 113 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 RETNQ9HD89 108 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 LENEPQ9Y5L5 61 aa10.83□□□□□ -0.68
CCNE1-202ENST00000357943 COL7A1Q02388 2944 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 RBMY1A1P0DJD3 496 aaKnown RBP10.82□□□□□ -0.68
CCNE1-202ENST00000357943 RBMY1CP0DJD4 496 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 RPL35P42766 123 aaKnown RBP10.82□□□□□ -0.68
CCNE1-202ENST00000357943 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
CCNE1-202ENST00000357943 Q86TA4 180 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 IGF2BP2-AS1Q96M15 143 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 TM2D3Q9BRN9 247 aa10.82□□□□□ -0.68
CCNE1-202ENST00000357943 FBLL1A6NHQ2 334 aaKnown RBP10.81□□□□□ -0.68
CCNE1-202ENST00000357943 SNAPINO95295 136 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 AMBPP02760 352 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 GPX1P07203 203 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 C1orf158Q8N1D5 194 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 C8orf49Q96NF6 230 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 RCHY1Q96PM5 261 aa10.81□□□□□ -0.68
CCNE1-202ENST00000357943 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 INSP01308 110 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 LTAP01374 205 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 RNASE4P34096 147 aaKnown RBP10.8□□□□□ -0.68
CCNE1-202ENST00000357943 Q6ZQT7 251 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 RNF183Q96D59 192 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 NDFIP1Q9BT67 221 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 IGHV3OR16-12A0A075B7B8 117 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 SPRY2O43597 315 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 S100A12P80511 92 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 SPATA25Q9BR10 227 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 PARLQ9H300 379 aa10.8□□□□□ -0.68
CCNE1-202ENST00000357943 C7orf71A4D174 169 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 ZNF324O75467 553 aaPredicted RBP10.79□□□□□ -0.68
CCNE1-202ENST00000357943 S100A9P06702 114 aaKnown RBP10.79□□□□□ -0.68
CCNE1-202ENST00000357943 TAS2R60P59551 318 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 FAM74A3Q4VXF1 159 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 SAPCD1Q5SSQ6 148 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 ZNF705AQ6ZN79 300 aaPredicted RBP10.79□□□□□ -0.68
CCNE1-202ENST00000357943 BAGE2Q86Y30 109 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 NHLRC2Q8NBF2 726 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 ZFP30Q9Y2G7 519 aa10.79□□□□□ -0.68
CCNE1-202ENST00000357943 TRBV20OR9-2A0A075B6H5 130 aa10.78□□□□□ -0.68
CCNE1-202ENST00000357943 ZNF727A8MUV8 499 aa10.78□□□□□ -0.68
CCNE1-202ENST00000357943 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
CCNE1-202ENST00000357943 SMIM7Q9BQ49 75 aa10.78□□□□□ -0.68
CCNE1-202ENST00000357943 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
CCNE1-202ENST00000357943 TP53TG1Q9Y2A0 90 aa10.78□□□□□ -0.68
CCNE1-202ENST00000357943 GCGP01275 180 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 PRM2P04554 102 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 ZNF674Q2M3X9 581 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 CENPWQ5EE01 88 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 OR11H2Q8NH07 326 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 TMEM208Q9BTX3 173 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 MLST8Q9BVC4 326 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 BIN3Q9NQY0 253 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 GOLT1BQ9Y3E0 138 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 X6R8D5 127 aa10.77□□□□□ -0.68
CCNE1-202ENST00000357943 TENM3Q9P273 2699 aa10.77□□□□□ -0.69
CCNE1-202ENST00000357943 PGPEP1LA6NFU8 196 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 Q6AWC8 147 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 TMEM183AQ8IXX5 376 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 LINC01587Q99440 93 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 SDF2L1Q9HCN8 221 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 NAT8Q9UHE5 227 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 M0R036 132 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 HTN1P15515 57 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 GNG4P50150 75 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 CRIP1P50238 77 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 TMEM241Q24JQ0 296 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 COX8CQ7Z4L0 72 aa10.76□□□□□ -0.69
CCNE1-202ENST00000357943 H7BYZ3 331 aa10.75□□□□□ -0.69
CCNE1-202ENST00000357943 IGLV2-8P01709 118 aa10.75□□□□□ -0.69
CCNE1-202ENST00000357943 NHLRC4P0CG21 123 aaPredicted RBP10.75□□□□□ -0.69
CCNE1-202ENST00000357943 PNRC1Q12796 327 aaPredicted RBP10.75□□□□□ -0.69
CCNE1-202ENST00000357943 TRAV21A0A0B4J279 112 aa10.74□□□□□ -0.69
CCNE1-202ENST00000357943 PFN1P07737 140 aaKnown RBP10.74□□□□□ -0.69
CCNE1-202ENST00000357943 TMEM256Q8N2U0 113 aa10.74□□□□□ -0.69
CCNE1-202ENST00000357943 C7orf77A4D0Y5 90 aa10.73□□□□□ -0.69
CCNE1-202ENST00000357943 ZNF705GA8MUZ8 300 aaPredicted RBP10.73□□□□□ -0.69
CCNE1-202ENST00000357943 C9JCJ5 164 aa10.73□□□□□ -0.69
CCNE1-202ENST00000357943 AZU1P20160 251 aa10.73□□□□□ -0.69
CCNE1-202ENST00000357943 RHEBQ15382 184 aa10.73□□□□□ -0.69
CCNE1-202ENST00000357943 MUC21Q5SSG8 566 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms