RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DEFB125Q8N687 156 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 AGPAT4-IT1Q9H0P7 198 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 MINOS1-NBL1R4GNA1 71 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 CFAP46Q8IYW2 2715 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 CIDEAO60543 219 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 SCGB2A1O75556 95 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 HIST1H1AQ02539 215 aaPredicted RBP15.76■□□□□ 0.11
COL13A1-202ENST00000357811 UFC1Q9Y3C8 167 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 U3KQK5 164 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 POLQO75417 2590 aa15.76■□□□□ 0.11
COL13A1-202ENST00000357811 CLPSL1A2RUU4 121 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 GOSR1O95249 250 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 EBI3Q14213 229 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 RNF185Q96GF1 192 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 CACNA1AO00555 2505 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 CUBNO60494 3623 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 LEPP41159 167 aa15.75■□□□□ 0.11
COL13A1-202ENST00000357811 FAM110DQ8TAY7 271 aaPredicted RBP15.75■□□□□ 0.11
COL13A1-202ENST00000357811 PKD1L2Q7Z442 2459 aa15.74■□□□□ 0.11
COL13A1-202ENST00000357811 IGKV3D-20A0A0C4DH25 116 aa15.74■□□□□ 0.11
COL13A1-202ENST00000357811 IGF1P05019 195 aa15.74■□□□□ 0.11
COL13A1-202ENST00000357811 RAB37Q96AX2 223 aa15.73■□□□□ 0.11
COL13A1-202ENST00000357811 GAGE10A6NGK3 116 aa15.73■□□□□ 0.11
COL13A1-202ENST00000357811 UBE2E1P51965 193 aa15.73■□□□□ 0.11
COL13A1-202ENST00000357811 C1orf122Q6ZSJ8 110 aa15.73■□□□□ 0.11
COL13A1-202ENST00000357811 DTX2Q86UW9 622 aa15.73■□□□□ 0.11
COL13A1-202ENST00000357811 SORL1Q92673 2214 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 TNFRSF6BO95407 300 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 CHTOPQ9Y3Y2 248 aaKnown RBP15.72■□□□□ 0.11
COL13A1-202ENST00000357811 MYO18BQ8IUG5 2567 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 C7orf71A4D174 169 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 C19orf84I3L1E1 186 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 PRSS1P07477 247 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 LCNL1Q6ZST4 164 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 MAP1LC3AQ9H492 121 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 FGF6P10767 208 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 LY6EQ16553 131 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 TMEM97Q5BJF2 176 aa15.72■□□□□ 0.11
COL13A1-202ENST00000357811 OOSP1A8MZH6 123 aa15.71■□□□□ 0.11
COL13A1-202ENST00000357811 TRBV12-3P01733 135 aa15.71■□□□□ 0.11
COL13A1-202ENST00000357811 C8orf86Q6ZUL3 223 aa15.71■□□□□ 0.11
COL13A1-202ENST00000357811 TRAV8-2A0A0B4J237 113 aa15.71■□□□□ 0.11
COL13A1-202ENST00000357811 CENPVL3A0A0U1RRI6 287 aa15.71■□□□□ 0.11
COL13A1-202ENST00000357811 RPS20P60866 119 aaKnown RBP15.71■□□□□ 0.11
COL13A1-202ENST00000357811 ZANQ9Y493 2812 aa15.71■□□□□ 0.1
COL13A1-202ENST00000357811 IGHV3-11P01762 117 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 LMO4P61968 165 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 PAX8Q06710 450 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 NPFFO15130 113 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 TMEM78Q5T7P6 136 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 METTL26Q96S19 204 aa15.7■□□□□ 0.1
COL13A1-202ENST00000357811 PEF1Q9UBV8 284 aaKnown RBP15.7■□□□□ 0.1
COL13A1-202ENST00000357811 FBLL1A6NHQ2 334 aaKnown RBP15.69■□□□□ 0.1
COL13A1-202ENST00000357811 RPL11P62913 178 aaKnown RBP15.69■□□□□ 0.1
COL13A1-202ENST00000357811 DEFB104AQ8WTQ1 72 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 LGALS9BQ3B8N2 356 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 LGALS9CQ6DKI2 356 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 AP1S3Q96PC3 154 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 USP9XQ93008 2570 aaPredicted RBP15.69■□□□□ 0.1
COL13A1-202ENST00000357811 K7EMI3 77 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 TMEM158Q8WZ71 300 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 C16orf92Q96LL3 132 aa15.69■□□□□ 0.1
COL13A1-202ENST00000357811 CD5LO43866 347 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 EFNA4P52798 201 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 GLMPQ8WWB7 406 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 EEF1AKMT3Q96AZ1 226 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 IGKV2D-26A0A0A0MRZ7 120 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 H3BVH4 76 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 UNQ9165/PRO28630Q6UXU0 137 aa15.68■□□□□ 0.1
COL13A1-202ENST00000357811 COX8CQ7Z4L0 72 aa15.67■□□□□ 0.1
COL13A1-202ENST00000357811 ZFYVE26Q68DK2 2539 aa15.67■□□□□ 0.1
COL13A1-202ENST00000357811 PRR9Q5T870 116 aa15.67■□□□□ 0.1
COL13A1-202ENST00000357811 FOXC2Q99958 501 aa15.67■□□□□ 0.1
COL13A1-202ENST00000357811 ATP5G2Q06055 141 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 SPANXN1Q5VSR9 72 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 KLK15Q9H2R5 256 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 TRAV40A0A0B4J280 105 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 C5orf56Q8N8D9 126 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 FAM208BQ5VWN6 2430 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 A1L4Q6 167 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 SMAD7O15105 426 aaKnown RBP15.66■□□□□ 0.1
COL13A1-202ENST00000357811 GTSCR1Q86UQ5 136 aa15.66■□□□□ 0.1
COL13A1-202ENST00000357811 ACACBO00763 2458 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 SRD5A1P18405 259 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 LINC01559Q495D7 138 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 C20orf173Q96LM9 149 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 F6UB75 175 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 H3BUT2 72 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 UCNP55089 124 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 KIR3DS1Q14943 382 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 Q5PR19 223 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 OR1N2Q8NGR9 330 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 PSMG3-AS1Q96PY0 264 aa15.65■□□□□ 0.1
COL13A1-202ENST00000357811 M0R381 172 aa15.64■□□□□ 0.09
COL13A1-202ENST00000357811 BOD1L2Q8IYS8 172 aa15.64■□□□□ 0.09
COL13A1-202ENST00000357811 WFDC12Q8WWY7 111 aa15.64■□□□□ 0.09
COL13A1-202ENST00000357811 SLC50A1Q9BRV3 221 aa15.64■□□□□ 0.09
COL13A1-202ENST00000357811 TMEM160Q9NX00 188 aa15.64■□□□□ 0.09
COL13A1-202ENST00000357811 TRAV41A0A0B4J266 112 aa15.63■□□□□ 0.09
COL13A1-202ENST00000357811 COL25A1Q9BXS0 654 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms