RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SRSF2Q01130 221 aaKnown RBP12.12□□□□□ -0.47
PHTF1-201ENST00000357783 LINC01559Q495D7 138 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 ORAOV1Q8WV07 137 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 GLMPQ8WWB7 406 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 PSMG3-AS1Q96PY0 264 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 SMAD7O15105 426 aaKnown RBP12.12□□□□□ -0.47
PHTF1-201ENST00000357783 PF4V1P10720 104 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 TSPOP30536 169 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 CKS2P33552 79 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 OR10AG1Q8NH19 301 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 PMCHL2Q9BQD1 86 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 TMEM191AQ9H0A3 160 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 LAMTOR2Q9Y2Q5 125 aa12.12□□□□□ -0.47
PHTF1-201ENST00000357783 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
PHTF1-201ENST00000357783 C11orf21Q9P2W6 132 aa12.11□□□□□ -0.47
PHTF1-201ENST00000357783 RBX1P62877 108 aa12.11□□□□□ -0.47
PHTF1-201ENST00000357783 MRPL53Q96EL3 112 aaKnown RBP12.11□□□□□ -0.47
PHTF1-201ENST00000357783 TP73-AS1Q9UF72 201 aa12.11□□□□□ -0.47
PHTF1-201ENST00000357783 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 CCL25O15444 150 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 NPYP01303 97 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 RNASE8Q8TDE3 154 aaKnown RBP12.1□□□□□ -0.47
PHTF1-201ENST00000357783 C20orf173Q96LM9 149 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 FXYD7P58549 80 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 Q6ZQT7 251 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 FAM208BQ5VWN6 2430 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 B4DSR2 109 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 NDUFA4O00483 81 aa12.1□□□□□ -0.47
PHTF1-201ENST00000357783 A0A096LNJ9 63 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 HIST1H1AQ02539 215 aaPredicted RBP12.09□□□□□ -0.47
PHTF1-201ENST00000357783 FOXE3Q13461 319 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 C9orf47Q6ZRZ4 202 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 CNFNQ9BYD5 112 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
PHTF1-201ENST00000357783 PRB1P04280 392 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 PTTG1IPP53801 180 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 OR4X2Q8NGF9 303 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 RNF185Q96GF1 192 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 USMG5Q96IX5 58 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 SPOCK3Q9BQ16 436 aa12.09□□□□□ -0.47
PHTF1-201ENST00000357783 C9orf139Q6ZV77 190 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 OR8A1Q8NGG7 326 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 POLQO75417 2590 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 USP24Q9UPU5 2620 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 USP9YO00507 2555 aaPredicted RBP12.08□□□□□ -0.48
PHTF1-201ENST00000357783 H3BUA1 57 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 GPHB5Q86YW7 130 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 ST20Q9HBF5 79 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 CENPEQ02224 2701 aa12.08□□□□□ -0.48
PHTF1-201ENST00000357783 HSBP1L1C9JCN9 74 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 J3KRW8 73 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 GAS8-AS1O95177 125 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 RPL11P62913 178 aaKnown RBP12.07□□□□□ -0.48
PHTF1-201ENST00000357783 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 LINC01545Q5VT33 79 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 IGKV3-7A0A075B6H7 116 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 HINT1P49773 126 aaPredicted RBP12.07□□□□□ -0.48
PHTF1-201ENST00000357783 DEFB1P60022 68 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 NPFFR1Q9GZQ6 430 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
PHTF1-201ENST00000357783 ZNF462Q96JM2 2506 aa12.07□□□□□ -0.48
PHTF1-201ENST00000357783 PRR9Q5T870 116 aa12.06□□□□□ -0.48
PHTF1-201ENST00000357783 K7EP13 123 aa12.06□□□□□ -0.48
PHTF1-201ENST00000357783 UBE2V1Q13404 147 aa12.06□□□□□ -0.48
PHTF1-201ENST00000357783 LRRK2Q5S007 2527 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 BRI3O95415 125 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 EVI2AP22794 236 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 MAPK1IP1LQ8NDC0 245 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 ZANQ9Y493 2812 aa12.05□□□□□ -0.48
PHTF1-201ENST00000357783 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 HBDP02042 147 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 IGHV7-4-1A0A0J9YVY3 117 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 IGHV4-59P01825 116 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 GATA1P15976 413 aaPredicted RBP12.04□□□□□ -0.48
PHTF1-201ENST00000357783 CDKN1BP46527 198 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 DSCR9P59020 149 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 MAP1LC3AQ9H492 121 aa12.04□□□□□ -0.48
PHTF1-201ENST00000357783 A0A0G2JLM5 398 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 SOCS3O14543 225 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 FBN2P35556 2912 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 PPBPP02775 128 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 COTL1Q14019 142 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 DEFB112Q30KQ8 113 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 Q6ZVH6 145 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
PHTF1-201ENST00000357783 TNFRSF6BO95407 300 aa12.02□□□□□ -0.48
PHTF1-201ENST00000357783 RHPN1-AS1Q9BWJ2 59 aa12.02□□□□□ -0.48
PHTF1-201ENST00000357783 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.48
PHTF1-201ENST00000357783 H3BVH4 76 aa12.02□□□□□ -0.49
PHTF1-201ENST00000357783 SLC25A16P16260 332 aa12.02□□□□□ -0.49
PHTF1-201ENST00000357783 GATA3P23771 443 aa12.02□□□□□ -0.49
PHTF1-201ENST00000357783 CFHR3Q02985 330 aa12.02□□□□□ -0.49
PHTF1-201ENST00000357783 SLC25A34Q6PIV7 304 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms