RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 TM2D2Q9BX73 214 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 IGKV3D-20A0A0C4DH25 116 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 ERCC8Q13216 396 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 TMEM78Q5T7P6 136 aa13.65□□□□□ -0.22
RTN4-204ENST00000357732 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 MYOZ3Q8TDC0 251 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 LAGE3Q14657 143 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 FOXC2Q99958 501 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 LENEPQ9Y5L5 61 aa13.64□□□□□ -0.23
RTN4-204ENST00000357732 TRBV7-1A0A0A6YYK4 115 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 AGPAT4-IT1Q9H0P7 198 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 IGKV2D-26A0A0A0MRZ7 120 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 CLEC3BP05452 202 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 WFDC3Q8IUB2 231 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 RAB37Q96AX2 223 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 EEF1AKMT3Q96AZ1 226 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 MRAP2Q96G30 205 aa13.63□□□□□ -0.23
RTN4-204ENST00000357732 ANKHD1Q8IWZ3 2542 aaKnown RBP13.62□□□□□ -0.23
RTN4-204ENST00000357732 TRBV25-1A0A075B6N4 114 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 IGHV7-4-1A0A0J9YVY3 117 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 GCSHP23434 173 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 PLNP26678 52 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 ZC2HC1BQ5TFG8 222 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 NRACQ8N912 160 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 METTL26Q96S19 204 aa13.62□□□□□ -0.23
RTN4-204ENST00000357732 SAP30O75446 220 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 GAS8-AS1O95177 125 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 UBE2E1P51965 193 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 PTPRZ1P23471 2315 aaPredicted RBP13.61□□□□□ -0.23
RTN4-204ENST00000357732 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 K7EMI3 77 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 CEND1Q8N111 149 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 U3KQE9 123 aa13.61□□□□□ -0.23
RTN4-204ENST00000357732 A0A087WX48 190 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 TCTAP57738 103 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 ADORA2A-AS1P86434 159 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 RNF182Q8N6D2 247 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 FXYD2P54710 66 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 ABCA4P78363 2273 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 PTPRQQ9UMZ3 2332 aa13.6□□□□□ -0.23
RTN4-204ENST00000357732 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 LINC01619G3V211 115 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
RTN4-204ENST00000357732 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 SLC25A16P16260 332 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 ECSCRQ19T08 205 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 C8orf86Q6ZUL3 223 aa13.59□□□□□ -0.23
RTN4-204ENST00000357732 HRNRQ86YZ3 2850 aaPredicted RBP13.58□□□□□ -0.24
RTN4-204ENST00000357732 GATA1P15976 413 aaPredicted RBP13.58□□□□□ -0.24
RTN4-204ENST00000357732 GTSCR1Q86UQ5 136 aa13.58□□□□□ -0.24
RTN4-204ENST00000357732 TRGV3P03979 118 aa13.58□□□□□ -0.24
RTN4-204ENST00000357732 PPIFP30405 207 aaKnown RBP13.58□□□□□ -0.24
RTN4-204ENST00000357732 IGHV3OR16-8A0A075B7F1 116 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 IGHV3-35A0A0C4DH35 117 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 SPANXN1Q5VSR9 72 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 C9orf139Q6ZV77 190 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 NAA38Q9BRA0 125 aaKnown RBP13.57□□□□□ -0.24
RTN4-204ENST00000357732 MRPL35Q9NZE8 188 aaKnown RBP13.57□□□□□ -0.24
RTN4-204ENST00000357732 ZFP36P26651 326 aaKnown RBP13.57□□□□□ -0.24
RTN4-204ENST00000357732 CLEC19AQ6UXS0 136 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 TMEM160Q9NX00 188 aa13.57□□□□□ -0.24
RTN4-204ENST00000357732 TRAV40A0A0B4J280 105 aa13.56□□□□□ -0.24
RTN4-204ENST00000357732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.56□□□□□ -0.24
RTN4-204ENST00000357732 ORMDL2Q53FV1 153 aa13.56□□□□□ -0.24
RTN4-204ENST00000357732 AJUBAQ96IF1 538 aa13.56□□□□□ -0.24
RTN4-204ENST00000357732 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
RTN4-204ENST00000357732 SMIM2Q9BVW6 85 aa13.56□□□□□ -0.24
RTN4-204ENST00000357732 CENPVL3A0A0U1RRI6 287 aa13.55□□□□□ -0.24
RTN4-204ENST00000357732 E9PLD3 99 aa13.55□□□□□ -0.24
RTN4-204ENST00000357732 H7C1H1 209 aa13.55□□□□□ -0.24
RTN4-204ENST00000357732 UFC1Q9Y3C8 167 aa13.55□□□□□ -0.24
RTN4-204ENST00000357732 F8VRH5 84 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 TM4SF20Q53R12 229 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 FAM223BA6NKX1 122 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 MED14OSP0DP75 135 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 FAM223AQ8IWN6 122 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 LINC00477Q96M19 166 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 SVEP1Q4LDE5 3571 aa13.54□□□□□ -0.24
RTN4-204ENST00000357732 F8W1H4 67 aa13.53□□□□□ -0.24
RTN4-204ENST00000357732 NHP2Q9NX24 153 aaKnown RBP13.53□□□□□ -0.24
RTN4-204ENST00000357732 SPTA1P02549 2419 aa13.53□□□□□ -0.24
RTN4-204ENST00000357732 ZNF207O43670 478 aaKnown RBP13.53□□□□□ -0.24
RTN4-204ENST00000357732 ATP5G2Q06055 141 aa13.53□□□□□ -0.24
RTN4-204ENST00000357732 TTTY13Q9BZ97 58 aa13.53□□□□□ -0.24
RTN4-204ENST00000357732 M0R381 172 aa13.52□□□□□ -0.24
RTN4-204ENST00000357732 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.24
RTN4-204ENST00000357732 ITLN2Q8WWU7 325 aaPredicted RBP13.52□□□□□ -0.24
RTN4-204ENST00000357732 IGHV3-66A0A0C4DH42 116 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 PPP1R17O96001 155 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 SAA4P35542 130 aa13.52□□□□□ -0.25
RTN4-204ENST00000357732 GLMPQ8WWB7 406 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms