RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 TIMM17AQ99595 171 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 DCTN5Q9BTE1 182 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 VSIRQ9H7M9 311 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 TRAV41A0A0B4J266 112 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 C15orf53Q8NAA6 179 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 ZNF784Q8NCA9 323 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-202ENST00000357162 IGHV3-72A0A0B4J1Y9 119 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 LINC00473A8K010 186 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 TMEM178BH3BS89 294 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 FAM216BQ8N7L0 139 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 C9JQL5 133 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PEAR1Q5VY43 1037 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-202ENST00000357162 TEX36Q5VZQ5 186 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 IGHV1-3A0A0C4DH29 117 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 APELAP0DMC3 54 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 CDK2AP2O75956 126 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 MAFAQ8NHW3 353 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-202ENST00000357162 PRSS22Q9GZN4 317 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 LYRM9A8MSI8 78 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 DMRTC2Q8IXT2 367 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-202ENST00000357162 DEFB123Q8N688 67 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 H3BRN7 92 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 RFPL3SP0C7P2 107 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 SS18Q15532 418 aa5.3□□□□□ -1.56
VPS13B-202ENST00000357162 LINC00158P58513 81 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 EGR2P11161 476 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-202ENST00000357162 NDUFA4O00483 81 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 AGFG2O95081 481 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 CGB1A6NKQ9 187 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 J3KRW8 73 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 PRR25Q96S07 402 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 SCRT2Q9NQ03 307 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 NDUFS7O75251 213 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 TGFBR3LH3BV60 316 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 ARMS2P0C7Q2 107 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 FOXE3Q13461 319 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 CPAMD8Q8IZJ3 1885 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 F6UB75 175 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 GPHA2Q96T91 129 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 TOMM7Q9P0U1 55 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 FGF6P10767 208 aa5.29□□□□□ -1.56
VPS13B-202ENST00000357162 TRAV12-3A0A0B4J271 114 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 A0A1W2PRD5 423 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 A0A1W2PRF3 423 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 A0A1W2PRM7 423 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CCL25O15444 150 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 THBDP07204 575 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CFC1P0CG37 223 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CXCL5P42830 114 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 MRPS36P82909 103 aaKnown RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 RPP25Q9BUL9 199 aaKnown RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 ORMDL1Q9P0S3 153 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 IGHV3-21A0A0B4J1V1 117 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 SDHAF1A6NFY7 115 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 C14orf178Q8N769 122 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 IGHG3P01860 377 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 TM2D2Q9BX73 214 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 KNCNA6PVL3 124 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 LINC00643Q86TS7 51 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 FXYD5Q96DB9 178 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 TRAV40A0A0B4J280 105 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 V9GYY9 64 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 TEX48A0A1B0GUV7 120 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CD59P13987 128 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 CLEC19AQ6UXS0 136 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 TRBV25-1A0A075B6N4 114 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 LINC01619G3V211 115 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 BUB1B-PAK6H3BSN5 160 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 MBD3L4A6NDZ8 208 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 MBD3L3A6NE82 208 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 MBD3L5A6NJ08 208 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 GATA2P23769 480 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 SYNJ2BPP57105 145 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 Q6ZRM9 215 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
VPS13B-202ENST00000357162 MBD3L2Q8NHZ7 208 aaPredicted RBP5.28□□□□□ -1.56
VPS13B-202ENST00000357162 IGLL5B9A064 214 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 IGLC1P0CG04 106 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 VMO1Q7Z5L0 202 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 MP68P56378 58 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 EXOC3-AS1Q8N2X6 119 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 MUC7Q8TAX7 377 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 ZNF71Q9NQZ8 489 aaPredicted RBP5.27□□□□□ -1.57
VPS13B-202ENST00000357162 H3BTX0 84 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 A4D1N5 150 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 CLPSP04118 112 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 FUSP35637 526 aaKnown RBP eCLIP5.27□□□□□ -1.57
VPS13B-202ENST00000357162 CDCP2Q5VXM1 449 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 PRSS57Q6UWY2 283 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 PSPNO60542 156 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 SSC4DQ8WTU2 575 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 CHCHD5Q9BSY4 110 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 IGKV1-6A0A0C4DH72 117 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 IGHG2P01859 326 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 TRGV4A0A0C4DH28 118 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 MRPL51Q4U2R6 128 aaKnown RBP5.27□□□□□ -1.57
VPS13B-202ENST00000357162 TRAV8-3A0A0A6YYJ7 113 aa5.27□□□□□ -1.57
VPS13B-202ENST00000357162 IGHV1-46P01743 117 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms