RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 EIF4E3Q8N5X7 224 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 RXFP4Q8TDU9 374 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 C2orf88Q9BSF0 95 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 NAGKQ9UJ70 344 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 SCO2A0A1W2PP80 73 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 PGPEP1LA6NFU8 196 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 DIRC3C9JPN6 131 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 CRXO43186 299 aaPredicted RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 EMP1P54849 157 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 RETNQ9HD89 108 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 GPX1P07203 203 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 MGST1P10620 155 aaKnown RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 DDTP30046 118 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 AKR1C3P42330 323 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 PEA15Q15121 130 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 GOLT1AQ6ZVE7 132 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 OR8A1Q8NGG7 326 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 OR2K2Q8NGT1 345 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 ZMAT4Q9H898 229 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 XCL2Q9UBD3 114 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 TIMM8BQ9Y5J9 83 aaPredicted RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 DNAH1Q9P2D7 4330 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 C11orf94C9JXX5 98 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 UBE2CO00762 179 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 DUSP14O95147 198 aaKnown RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 CA1P00915 261 aaPredicted RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 TCRAP04437 139 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 ZNF25P17030 456 aaPredicted RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 TSPOP30536 169 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 ZNF80P51504 273 aaPredicted RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 APOC4P55056 127 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 PDE6HQ13956 83 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 PRR27Q6MZM9 219 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 DPPA3Q6W0C5 159 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 PRNTQ86SH4 94 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 TRPT1Q86TN4 253 aaKnown RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 NHLRC2Q8NBF2 726 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 CSNK1G2-AS1Q8NCQ2 148 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 DAZAP1Q96EP5 407 aaKnown RBP2.94□□□□□ -1.94
LIG4-201ENST00000356922 EPDR1Q9UM22 224 aa2.94□□□□□ -1.94
LIG4-201ENST00000356922 LOC102724200A0A096LPH7 203 aaPredicted RBP2.93□□□□□ -1.94
LIG4-201ENST00000356922 TRAV2A0A0B4J234 112 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 HLA-DRB4P13762 266 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 CRIP1P50238 77 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 SPINK13Q1W4C9 94 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 SMIM15Q7Z3B0 74 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 CBLN2Q8IUK8 224 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C8orf49Q96NF6 230 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 LINC01587Q99440 93 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 HLA-DRB4X5D2U9 266 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 A0A1W2PRE2 83 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 SPRY2O43597 315 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 ZNF253O75346 499 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 PKIAP61925 76 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 FAM19A4Q96LR4 140 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 FAM110AQ9BQ89 295 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 OTORQ9NRC9 128 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C11orf21Q9P2W6 132 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 DYNC2H1Q8NCM8 4307 aaKnown RBP2.93□□□□□ -1.94
LIG4-201ENST00000356922 KMT2AQ03164 3969 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 RBFOX3A6NFN3 312 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C5orf52A6NGY3 159 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 RNASE4P34096 147 aaKnown RBP2.93□□□□□ -1.94
LIG4-201ENST00000356922 ZFAND2AQ8N6M9 145 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 TMEM75Q8N9X5 138 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 NIPSNAP3BQ9BS92 247 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 TPPP3Q9BW30 176 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 HYDINQ4G0P3 5121 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 LOC102723971A0A1B0GUV8 181 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 A8MTW9 85 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 DEFB4AO15263 64 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 IGLV2-8P01709 118 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 BCL2P10415 239 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 AZU1P20160 251 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 S100A4P26447 101 aaKnown RBP2.93□□□□□ -1.94
LIG4-201ENST00000356922 MEF2BQ02080 365 aaPredicted RBP2.93□□□□□ -1.94
LIG4-201ENST00000356922 FOXI2Q6ZQN5 318 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 LYPD1Q8N2G4 141 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C5orf17Q8NAS9 161 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 C1QTNF4Q9BXJ3 329 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 MANBALQ9NQG1 85 aa2.93□□□□□ -1.94
LIG4-201ENST00000356922 NPIPB6E9PJ23 425 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 OR5I1Q13606 314 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 PMS2P11Q13670 270 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 DEFB135Q30KP9 77 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 C9orf47Q6ZRZ4 202 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 CYB561D1Q8N8Q1 229 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 CSTL1Q9H114 145 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 ZNF492Q9P255 531 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 TP53TG3Q9ULZ0 132 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 KLF12Q9Y4X4 402 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 CXorf65A6NEN9 183 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 PEX7O00628 323 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 ZNF324O75467 553 aaPredicted RBP2.92□□□□□ -1.94
LIG4-201ENST00000356922 ORM1P02763 201 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 LINC00614P0C842 121 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 GFI1BQ5VTD9 330 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 UQCC3Q6UW78 93 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 SMCO4Q9NRQ5 59 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 249.6 ms