RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PGPA6NDG6 321 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 FBLL1A6NHQ2 334 aaKnown RBP2.86□□□□□ -1.95
CNOT4-202ENST00000356162 KLLNB2CW77 178 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 CT45A10P0DMU9 189 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 PPT1P50897 306 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF138P52744 262 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 ERCC8Q13216 396 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 IQCF2Q8IXL9 164 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 NUDT10Q8NFP7 164 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 FAM213BQ8TBF2 198 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 MBD3L1Q8WWY6 194 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 NUDT11Q96G61 164 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 LINC00467Q9BRT7 94 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 TCEAL7Q9BRU2 100 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF492Q9P255 531 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 LOC102723971A0A1B0GUV8 181 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 H7BYZ3 331 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 K7EQM0 130 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 RBMY1A1P0DJD3 496 aaKnown RBP2.86□□□□□ -1.95
CNOT4-202ENST00000356162 RBMY1CP0DJD4 496 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 FHITP49789 147 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 SULT1A2P50226 295 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 TAS2R60P59551 318 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 CD300CQ08708 224 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 RBMY1FQ15415 496 aaKnown RBP2.86□□□□□ -1.95
CNOT4-202ENST00000356162 RRN3P1Q2M238 152 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 GFI1BQ5VTD9 330 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 C16orf74Q96GX8 76 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 VGLL1Q99990 258 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 NIPSNAP3BQ9BS92 247 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM208Q9BTX3 173 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 NKX6-2Q9C056 277 aaPredicted RBP2.86□□□□□ -1.95
CNOT4-202ENST00000356162 AGPAT4-IT1Q9H0P7 198 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 RPH3ALQ9UNE2 315 aa2.86□□□□□ -1.95
CNOT4-202ENST00000356162 TRAV12-2A0A075B6T6 113 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 IGHV3OR16-12A0A075B7B8 117 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 NUPR2A6NF83 97 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 FAM74A7A6NL05 159 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TCRAP04437 139 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 PRB4P10163 310 aaPredicted RBP2.85□□□□□ -1.95
CNOT4-202ENST00000356162 FGF8P55075 233 aaPredicted RBP2.85□□□□□ -1.95
CNOT4-202ENST00000356162 GNG5P63218 68 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 GOLT1AQ6ZVE7 132 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 ZFAND2AQ8N6M9 145 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 CYB561D1Q8N8Q1 229 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM75Q8N9X5 138 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 PYGO2Q9BRQ0 406 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 ATG101Q9BSB4 218 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 NDFIP1Q9BT67 221 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 MANBALQ9NQG1 85 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 YTHDF2Q9Y5A9 579 aaKnown RBP2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TRAV1-1A0A0B4J248 108 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 CXorf65A6NEN9 183 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TEX46H3BTG2 121 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF561-AS1K7EIQ3 104 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 PEX7O00628 323 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 UBE2G2P60604 165 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 BTN1A1Q13410 526 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF493Q6ZR52 646 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF680Q8NEM1 530 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 Q8TAT8 98 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 C11orf45Q8TAV5 145 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM263Q8WUH6 116 aaKnown RBP2.85□□□□□ -1.95
CNOT4-202ENST00000356162 HIST1H2BAQ96A08 127 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 LINC01587Q99440 93 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 CELA1Q9UNI1 258 aa2.85□□□□□ -1.95
CNOT4-202ENST00000356162 TRBV6-1A0A0K0K1D8 114 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 LYRM9A8MSI8 78 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF705GA8MUZ8 300 aaPredicted RBP2.84□□□□□ -1.95
CNOT4-202ENST00000356162 C11orf94C9JXX5 98 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 DEFB4AO15263 64 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 IFNA1P01562 189 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 GPX1P07203 203 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 SPART-AS1P0CW21 52 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 ANXA2RQ3ZCQ2 193 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 CASC10Q5T4H9 136 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 PRR9Q5T870 116 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 Q6AWC8 147 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 ZFAND6Q6FIF0 208 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 Q86TA4 180 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 RNASE8Q8TDE3 154 aaKnown RBP2.84□□□□□ -1.95
CNOT4-202ENST00000356162 SFT2D1Q8WV19 159 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 TMPRSS5Q9H3S3 457 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 DNAH1Q9P2D7 4330 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 STARD9Q9P2P6 4700 aa2.84□□□□□ -1.95
CNOT4-202ENST00000356162 DNAH6Q9C0G6 4158 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 TRAV10A0A0B4J240 114 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 TRAV12-3A0A0B4J271 114 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 F6UZH7 168 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 IFNA7P01567 189 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 TAGLN2P37802 199 aaKnown RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 AKR1C3P42330 323 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 NANOS2P60321 138 aaKnown RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 FLI1Q01543 452 aaPredicted RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 CEMP1Q6PRD7 247 aaPredicted RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 CCDC28AQ8IWP9 274 aa2.84□□□□□ -1.96
CNOT4-202ENST00000356162 EIF4E3Q8N5X7 224 aaKnown RBP2.84□□□□□ -1.96
CNOT4-202ENST00000356162 TXNDC17Q9BRA2 123 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms