RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SMIM17P0DL12 118 aa7.85□□□□□ -1.15
PTPRA-203ENST00000356147 WFDC12Q8WWY7 111 aa7.85□□□□□ -1.15
PTPRA-203ENST00000356147 VSTM5A8MXK1 200 aa7.85□□□□□ -1.15
PTPRA-203ENST00000356147 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
PTPRA-203ENST00000356147 RPL7P18124 248 aaKnown RBP7.85□□□□□ -1.15
PTPRA-203ENST00000356147 IGLV11-55A0A075B6I3 123 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 IGKV3D-20A0A0C4DH25 116 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 LY6LH3BQJ8 138 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 DPM2O94777 84 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 CTSGP08311 255 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 BMI1P35226 326 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 C5orf64Q2M2E5 130 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 PIP4P1Q86T03 277 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 PHLDA1Q8WV24 401 aaPredicted RBP7.84□□□□□ -1.15
PTPRA-203ENST00000356147 TNFRSF14Q92956 283 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 DPM3Q9P2X0 92 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 FABP5P3A8MUU1 101 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 DEFB1P60022 68 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 PDE6HQ13956 83 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 ECSCRQ19T08 205 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 CEND1Q8N111 149 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 ZNF479Q96JC4 524 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 HIST1H4GQ99525 98 aa7.84□□□□□ -1.15
PTPRA-203ENST00000356147 ATP5G2Q06055 141 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 IGFL3Q6UXB1 125 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 Q5PR19 223 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 RAB1BQ9H0U4 201 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 FAM90A27PA6NNH2 459 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 IGLL5B9A064 214 aa7.83□□□□□ -1.16
PTPRA-203ENST00000356147 ZNF672Q499Z4 452 aaPredicted RBP7.83□□□□□ -1.16
PTPRA-203ENST00000356147 CYSLTR1Q9Y271 337 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 IGF1P05019 195 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 CLEC3BP05452 202 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 C12orf74Q32Q52 190 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 AGPAT4-IT1Q9H0P7 198 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 ZMAT4Q9H898 229 aa7.82□□□□□ -1.16
PTPRA-203ENST00000356147 MYOZ3Q8TDC0 251 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 SPAG8Q99932 426 aaPredicted RBP7.81□□□□□ -1.16
PTPRA-203ENST00000356147 NXT2Q9NPJ8 142 aaKnown RBP7.81□□□□□ -1.16
PTPRA-203ENST00000356147 GAGE12HA6NDE8 117 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 H3BVH4 76 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 CD3EP07766 207 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 EMP1P54849 157 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 SPANXB1Q9NS25 103 aaPredicted RBP7.81□□□□□ -1.16
PTPRA-203ENST00000356147 C15orf32Q32M92 178 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 SPANXN1Q5VSR9 72 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 CLEC19AQ6UXS0 136 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 LINC00527Q9UJ94 153 aa7.81□□□□□ -1.16
PTPRA-203ENST00000356147 IGF2RP11717 2491 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 IGKV3-7A0A075B6H7 116 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 IGLV2-18A0A075B6J9 118 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 LINC01548A6NM66 108 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 E9PLD3 99 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 M0R381 172 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 TGFAP01135 160 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 FOXI2Q6ZQN5 318 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 Q8N8P6 123 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 B9A039 149 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 G3V318 75 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 Q8NA96 180 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 HIF1ANQ9NWT6 349 aa7.8□□□□□ -1.16
PTPRA-203ENST00000356147 LAGE3Q14657 143 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 TTC9CQ8N5M4 171 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 TM2D2Q9BX73 214 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 HIGD1BQ9P298 99 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 VPS13CQ709C8 3753 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 PTPRQQ9UMZ3 2332 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 NRACQ8N912 160 aa7.79□□□□□ -1.16
PTPRA-203ENST00000356147 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 ATP5LO75964 103 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 PRR9Q5T870 116 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 RPL39LQ96EH5 51 aaKnown RBP7.78□□□□□ -1.16
PTPRA-203ENST00000356147 C20orf78Q9BR46 151 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 RNF5Q99942 180 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 IGHV7-81A0A0B4J1V7 117 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 BUB3O43684 328 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 SCGB2A2Q13296 93 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 CD300EQ496F6 205 aaPredicted RBP7.78□□□□□ -1.16
PTPRA-203ENST00000356147 GAGE13Q4V321 117 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 CCDC144NLQ6NUI1 221 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 KLHL30-AS1Q8NEE0 82 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 NPBQ8NG41 125 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 PTH2Q96A98 100 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 VKORC1Q9BQB6 163 aa7.78□□□□□ -1.16
PTPRA-203ENST00000356147 SRSF8Q9BRL6 282 aaKnown RBP7.78□□□□□ -1.16
PTPRA-203ENST00000356147 CUBNO60494 3623 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 A0A087WX48 190 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 LINC01559Q495D7 138 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 VMO1Q7Z5L0 202 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 GLMPQ8WWB7 406 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 CLUHP3Q96NS8 147 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 CNFNQ9BYD5 112 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 HLA-DRB4P13762 266 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 CEACAM3P40198 252 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 CDSNQ15517 529 aa7.77□□□□□ -1.17
PTPRA-203ENST00000356147 TMEM78Q5T7P6 136 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms