RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 KIR3DS1Q14943 382 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 TMEM183BQ1AE95 376 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 C2CD4CQ8TF44 421 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 C11orf52Q96A22 123 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 ZFP30Q9Y2G7 519 aa11.28□□□□□ -0.6
TRIM13-201ENST00000356017 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.6
TRIM13-201ENST00000356017 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.6
TRIM13-201ENST00000356017 H7BYZ3 331 aa11.27□□□□□ -0.6
TRIM13-201ENST00000356017 MIFP14174 115 aa11.27□□□□□ -0.6
TRIM13-201ENST00000356017 LINC01587Q99440 93 aa11.27□□□□□ -0.6
TRIM13-201ENST00000356017 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.6
TRIM13-201ENST00000356017 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
TRIM13-201ENST00000356017 ZNF506Q5JVG8 444 aa11.27□□□□□ -0.61
TRIM13-201ENST00000356017 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
TRIM13-201ENST00000356017 X6R8D5 127 aa11.27□□□□□ -0.61
TRIM13-201ENST00000356017 TAS2R60P59551 318 aa11.26□□□□□ -0.61
TRIM13-201ENST00000356017 BTN1A1Q13410 526 aa11.26□□□□□ -0.61
TRIM13-201ENST00000356017 Q86TA4 180 aa11.26□□□□□ -0.61
TRIM13-201ENST00000356017 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
TRIM13-201ENST00000356017 ZNF324O75467 553 aaPredicted RBP11.25□□□□□ -0.61
TRIM13-201ENST00000356017 LTAP01374 205 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
TRIM13-201ENST00000356017 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
TRIM13-201ENST00000356017 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 SMUG1Q53HV7 270 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 TOR2AQ5JU69 321 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 Q6AWC8 147 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 PYGO2Q9BRQ0 406 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 MED9Q9NWA0 146 aa11.25□□□□□ -0.61
TRIM13-201ENST00000356017 RPL35P42766 123 aaKnown RBP11.24□□□□□ -0.61
TRIM13-201ENST00000356017 PRR9Q5T870 116 aa11.24□□□□□ -0.61
TRIM13-201ENST00000356017 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
TRIM13-201ENST00000356017 Q8NAQ8 132 aa11.24□□□□□ -0.61
TRIM13-201ENST00000356017 DNAH9Q9NYC9 4486 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 NBEAL2Q6ZNJ1 2754 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 GCGP01275 180 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 HTN1P15515 57 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 COX8CQ7Z4L0 72 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 BAGE2Q86Y30 109 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 TMEM183AQ8IXX5 376 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 C8orf49Q96NF6 230 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 C11orf68Q9H3H3 251 aaKnown RBP11.23□□□□□ -0.61
TRIM13-201ENST00000356017 SMDT1Q9H4I9 107 aa11.23□□□□□ -0.61
TRIM13-201ENST00000356017 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
TRIM13-201ENST00000356017 PFN1P07737 140 aaKnown RBP11.22□□□□□ -0.61
TRIM13-201ENST00000356017 DERL1Q9BUN8 251 aa11.22□□□□□ -0.61
TRIM13-201ENST00000356017 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
TRIM13-201ENST00000356017 PEA15Q15121 130 aa11.21□□□□□ -0.61
TRIM13-201ENST00000356017 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.61
TRIM13-201ENST00000356017 ZNF493Q6ZR52 646 aa11.21□□□□□ -0.61
TRIM13-201ENST00000356017 SMIM12Q96EX1 92 aa11.21□□□□□ -0.61
TRIM13-201ENST00000356017 IGHV1OR15-1A0A075B7D0 117 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 GNG4P50150 75 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 EIF4E3Q8N5X7 224 aaKnown RBP11.2□□□□□ -0.62
TRIM13-201ENST00000356017 TMEM263Q8WUH6 116 aaKnown RBP11.2□□□□□ -0.62
TRIM13-201ENST00000356017 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 CBY3A6NI87 242 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 ZNF80P51504 273 aaPredicted RBP11.2□□□□□ -0.62
TRIM13-201ENST00000356017 ANXA2RQ3ZCQ2 193 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 KCNS1Q96KK3 526 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
TRIM13-201ENST00000356017 HUWE1Q7Z6Z7 4374 aaKnown RBP11.19□□□□□ -0.62
TRIM13-201ENST00000356017 TDRG1Q3Y452 100 aa11.19□□□□□ -0.62
TRIM13-201ENST00000356017 FAM162BQ5T6X4 162 aa11.19□□□□□ -0.62
TRIM13-201ENST00000356017 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
TRIM13-201ENST00000356017 PARLQ9H300 379 aa11.19□□□□□ -0.62
TRIM13-201ENST00000356017 EDA2RQ9HAV5 297 aa11.19□□□□□ -0.62
TRIM13-201ENST00000356017 COL7A1Q02388 2944 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 RAB19A4D1S5 217 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 DEFB4AO15263 64 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 SRP19P09132 144 aaKnown RBP11.18□□□□□ -0.62
TRIM13-201ENST00000356017 AZU1P20160 251 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 CEBPGP53567 150 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 MUC21Q5SSG8 566 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 Q6ZQT7 251 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 NHLRC2Q8NBF2 726 aa11.18□□□□□ -0.62
TRIM13-201ENST00000356017 RNASE8Q8TDE3 154 aaKnown RBP11.18□□□□□ -0.62
TRIM13-201ENST00000356017 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 C9JCJ5 164 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 PRM2P04554 102 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 EMP1P54849 157 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 ZNF674Q2M3X9 581 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 TRGV11A0A075B6L2 103 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
TRIM13-201ENST00000356017 SDF2L1Q9HCN8 221 aa11.17□□□□□ -0.62
TRIM13-201ENST00000356017 TIMM8BQ9Y5J9 83 aaPredicted RBP11.17□□□□□ -0.62
TRIM13-201ENST00000356017 TRBV20OR9-2A0A075B6H5 130 aa11.16□□□□□ -0.62
TRIM13-201ENST00000356017 SNURFLB1AK76 121 aa11.16□□□□□ -0.62
TRIM13-201ENST00000356017 SPART-AS1P0CW21 52 aa11.16□□□□□ -0.62
TRIM13-201ENST00000356017 CRIP1P50238 77 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms