RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 HIST2H2BCQ6DN03 193 aa9.28□□□□□ -0.92
NUDCD3-202ENST00000355451 U3KQE9 123 aa9.28□□□□□ -0.92
NUDCD3-202ENST00000355451 TRPM3Q9HCF6 1732 aaPredicted RBP9.27□□□□□ -0.92
NUDCD3-202ENST00000355451 ZNF134P52741 427 aa9.27□□□□□ -0.92
NUDCD3-202ENST00000355451 DUX4L9Q6RFH8 374 aaPredicted RBP9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 H3BQ85 93 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 NDUFB8O95169 186 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 SLC25A29Q8N8R3 303 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 A0A087WZ39 114 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 TECTAO75443 2155 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 A0A087WWC5 75 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 TBX6O95947 436 aaPredicted RBP9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 ZNF837Q96EG3 531 aaPredicted RBP9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 NMBP08949 121 aa9.27□□□□□ -0.93
NUDCD3-202ENST00000355451 ATP5G1P05496 136 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 H2BFSP57053 126 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 AMTNQ6UX39 209 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 NPBQ8NG41 125 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 BRCA1P38398 1863 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 AGRNO00468 2067 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 C5orf24Q7Z6I8 188 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 NDUFA1O15239 70 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 BAALC-AS2P0C853 105 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 KIAA1551Q9HCM1 1747 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 SIPA1L3O60292 1781 aaPredicted RBP9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 PPP1R3EQ9H7J1 279 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 PTPN13Q12923 2485 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 LINC00271P0C7V0 271 aa9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 MRPL27Q9P0M9 148 aaKnown RBP9.26□□□□□ -0.93
NUDCD3-202ENST00000355451 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 TICRRQ7Z2Z1 1910 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 UBR3Q6ZT12 1888 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 IGKV1-16P04430 117 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 KIAA1549Q9HCM3 1950 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 A0A096LNI7 61 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 DEFB136Q30KP8 78 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 GGNQ86UU5 652 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 MRPS18AQ9NVS2 196 aaKnown RBP9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 ZFP2Q6ZN57 461 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 C16orf74Q96GX8 76 aa9.25□□□□□ -0.93
NUDCD3-202ENST00000355451 LYPD2Q6UXB3 125 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 IGHV2-70DA0A0C4DH43 119 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 ADAMTSL3P82987 1691 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 IGKV1-6A0A0C4DH72 117 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 NCR3O14931 201 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 SRSF8Q9BRL6 282 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 PDE6HQ13956 83 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 SRSF2Q01130 221 aaKnown RBP9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 HS3ST6Q96QI5 342 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 CYTL1Q9NRR1 136 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 G3V318 75 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 AGMATQ9BSE5 352 aa9.24□□□□□ -0.93
NUDCD3-202ENST00000355451 TRAV26-2A0A0B4J265 109 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 NHSQ6T4R5 1651 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 IGKV2-29A2NJV5 120 aaPredicted RBP9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 RNF144BQ7Z419 303 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 BRWD3Q6RI45 1802 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 E7EQL1 145 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 PSMB8P28062 276 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 TTC28Q96AY4 2481 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 SRRM5B3KS81 715 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 C18orf12Q96KH6 178 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 VPREB3Q9UKI3 123 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 FHL1Q13642 323 aa9.23□□□□□ -0.93
NUDCD3-202ENST00000355451 PRR20EP86478 221 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PRR20CP86479 221 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PRR20DP86480 221 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PRR20BP86481 221 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PRR20AP86496 221 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 WFDC11Q8NEX6 87 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 SYS1-DBNDD2H3BUS1 97 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PRO1854Q9UHT4 67 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 CD300CQ08708 224 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 TREML4Q6UXN2 200 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 Q9H8V8 135 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 HHLA3Q9XRX5 114 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 C5orf63A6NC05 138 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 DEFB113Q30KQ7 82 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 CD59P13987 128 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
NUDCD3-202ENST00000355451 PTPRFP10586 1907 aa9.21□□□□□ -0.93
NUDCD3-202ENST00000355451 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.93
NUDCD3-202ENST00000355451 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.93
NUDCD3-202ENST00000355451 TRBV10-2A0A0K0K1G8 114 aa9.21□□□□□ -0.93
NUDCD3-202ENST00000355451 TMEM75Q8N9X5 138 aa9.21□□□□□ -0.93
NUDCD3-202ENST00000355451 K7ENP7 123 aa9.21□□□□□ -0.94
NUDCD3-202ENST00000355451 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.94
NUDCD3-202ENST00000355451 LINC01620Q4KN68 170 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms