RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 IGHV3-23P01764 117 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 IGFL4Q6B9Z1 124 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 MAPKAPK5-AS1Q8N8E1 139 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 SPATA25Q9BR10 227 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 SH3BGRL2Q9UJC5 107 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 PRRC2CQ9Y520 2896 aaKnown RBP8.78□□□□□ -1
CAPN9-202ENST00000354537 TMEM11P17152 192 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 RRN3P1Q2M238 152 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 C20orf78Q9BR46 151 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 C11orf21Q9P2W6 132 aa8.78□□□□□ -1
CAPN9-202ENST00000354537 CENPVL3A0A0U1RRI6 287 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 KLRD1Q13241 179 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 NDUFS8O00217 210 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 TRGV3P03979 118 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 Q8N9W7 124 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 HIST1H4GQ99525 98 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 SMIM2Q9BVW6 85 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 U3KQE9 123 aa8.77□□□□□ -1.01
CAPN9-202ENST00000354537 TRAV8-2A0A0B4J237 113 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 MYMXA0A1B0GTQ4 84 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 CLPSL1A2RUU4 121 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 GAGE12HA6NDE8 117 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 PPIFP30405 207 aaKnown RBP8.76□□□□□ -1.01
CAPN9-202ENST00000354537 TOMM6Q96B49 74 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 OR11H12B2RN74 326 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 AZU1P20160 251 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 C15orf32Q32M92 178 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 GAGE13Q4V321 117 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 OR11H1Q8NG94 326 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 OR11H2Q8NH07 326 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 MSRB2Q9Y3D2 182 aa8.76□□□□□ -1.01
CAPN9-202ENST00000354537 TRBV7-1A0A0A6YYK4 115 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 M0R381 172 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 CLEC3BP05452 202 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 MED14OSP0DP75 135 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 WFDC2Q14508 124 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 SPANXN1Q5VSR9 72 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 PRO0461Q9UI25 63 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 SELENOKQ9Y6D0 94 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 LINC01549A6NIU2 74 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 PPP1R17O96001 155 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 NEXN-AS1Q8NBZ9 246 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 ATP6V0E2Q8NHE4 81 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 EEF1AKMT3Q96AZ1 226 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 METTL26Q96S19 204 aa8.75□□□□□ -1.01
CAPN9-202ENST00000354537 ABCA1O95477 2261 aa8.74□□□□□ -1.01
CAPN9-202ENST00000354537 LINC01560Q8TB33 94 aa8.74□□□□□ -1.01
CAPN9-202ENST00000354537 C8orf86Q6ZUL3 223 aa8.74□□□□□ -1.01
CAPN9-202ENST00000354537 SCGB3A1Q96QR1 104 aa8.74□□□□□ -1.01
CAPN9-202ENST00000354537 UFC1Q9Y3C8 167 aa8.74□□□□□ -1.01
CAPN9-202ENST00000354537 TSSC4Q9Y5U2 329 aaPredicted RBP8.74□□□□□ -1.01
CAPN9-202ENST00000354537 TMEM238LA0A1B0GVL6 79 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 A6NJY4 79 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 HOXA3O43365 443 aaPredicted RBP8.73□□□□□ -1.01
CAPN9-202ENST00000354537 LINC00477Q96M19 166 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 H3BMG7 143 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
CAPN9-202ENST00000354537 C9orf139Q6ZV77 190 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 CCDC140Q96MF4 163 aa8.73□□□□□ -1.01
CAPN9-202ENST00000354537 SPAG8Q99932 426 aaPredicted RBP8.73□□□□□ -1.01
CAPN9-202ENST00000354537 EFNA4P52798 201 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 C11orf71Q6IPW1 123 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 ASPMQ8IZT6 3477 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 TRAV26-2A0A0B4J265 109 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 RPL32P62910 135 aaKnown RBP8.72□□□□□ -1.01
CAPN9-202ENST00000354537 LCNL1Q6ZST4 164 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 POM121L12Q8N7R1 296 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 ITLN2Q8WWU7 325 aaPredicted RBP8.72□□□□□ -1.01
CAPN9-202ENST00000354537 SIRPDQ9H106 197 aa8.72□□□□□ -1.01
CAPN9-202ENST00000354537 LGALS1P09382 135 aaKnown RBP8.71□□□□□ -1.01
CAPN9-202ENST00000354537 PAPPA-AS1Q5QFB9 102 aa8.71□□□□□ -1.01
CAPN9-202ENST00000354537 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.01
CAPN9-202ENST00000354537 RAXQ9Y2V3 346 aa8.71□□□□□ -1.01
CAPN9-202ENST00000354537 TRAV21A0A0B4J279 112 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 TRBV7-9A0A0J9YWB2 115 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 A0A1B0GV72 72 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 OVOL1O14753 267 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 UBE2E1P51965 193 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 ETDBQ3ZM63 59 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 MORN3Q6PF18 240 aaPredicted RBP8.71□□□□□ -1.02
CAPN9-202ENST00000354537 CLEC19AQ6UXS0 136 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 RASL10AQ92737 203 aa8.71□□□□□ -1.02
CAPN9-202ENST00000354537 IGHV3OR16-8A0A075B7F1 116 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 IGHV1-69DA0A0B4J2H0 117 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 IGHV3-35A0A0C4DH35 117 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 ATP6V0E1O15342 81 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 LYRM7Q5U5X0 104 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 H3BVH4 76 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 UBE2D1P51668 147 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 ECSCRQ19T08 205 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 BAALCQ8WXS3 180 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
CAPN9-202ENST00000354537 ASIPP42127 132 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 ATP5G2Q06055 141 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 SMAGPQ0VAQ4 97 aa8.69□□□□□ -1.02
CAPN9-202ENST00000354537 PRR30Q53SZ7 412 aaPredicted RBP8.69□□□□□ -1.02
CAPN9-202ENST00000354537 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms