RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 IGLC7A0M8Q6 106 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 CFC1BP0CG36 223 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 CFC1P0CG37 223 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 DEFB131AP59861 70 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 ZNF493Q6ZR52 646 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 SMIM27A0A1W2PRY6 76 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 LINC01590Q5TEZ4 76 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 F8VRH5 84 aa6.51□□□□□ -1.37
SCN8A-201ENST00000354534 Q0VG73 95 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 C18orf32Q8TCD1 76 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 COL24A1Q17RW2 1714 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 CR1LQ2VPA4 569 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 C10orf55Q5SWW7 151 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 SDHAF1A6NFY7 115 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 K7EMI3 77 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 HGFACQ04756 655 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 H0YIZ8 118 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 IGHV1-2P23083 117 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 EFNA4P52798 201 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 TMEM75Q8N9X5 138 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 WDR83OSQ9Y284 106 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 OBSL1O75147 1896 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 PRSS46E5RG02 174 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 PAX9P55771 341 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 H3BQ85 93 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 IGLV3-21P80748 117 aaPredicted RBP6.5□□□□□ -1.37
SCN8A-201ENST00000354534 RNF152Q8N8N0 203 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 OTOGLQ3ZCN5 2332 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 TIRAPP58753 221 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 ICOSQ9Y6W8 199 aa6.5□□□□□ -1.37
SCN8A-201ENST00000354534 WISP1O95388 367 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 UBE2AP49459 152 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 Q9H8V8 135 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 PRRC2AP48634 2157 aaKnown RBP6.49□□□□□ -1.37
SCN8A-201ENST00000354534 A0A0J9YWU9 116 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 RNF166Q96A37 237 aaPredicted RBP6.49□□□□□ -1.37
SCN8A-201ENST00000354534 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 LYL1P12980 280 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 LY6G6FQ5SQ64 297 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 KLF2Q9Y5W3 355 aaPredicted RBP6.49□□□□□ -1.37
SCN8A-201ENST00000354534 IGHV2-70P01814 119 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 Q6ZWC4 215 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 FOXI2Q6ZQN5 318 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 RPP25LQ8N5L8 163 aaKnown RBP6.49□□□□□ -1.37
SCN8A-201ENST00000354534 NOTCH2Q04721 2471 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 NTF4P34130 210 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 SIVA1O15304 175 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 SLC22A18ASQ8N1D0 253 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 RHPN1-AS1Q9BWJ2 59 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 ZNF492Q9P255 531 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 CSPG4Q6UVK1 2322 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 PRR14LQ5THK1 2151 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 C5orf67F2Z3F1 127 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 UBE2E1P51965 193 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 Q6ZUT4 128 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 FAM223AQ8IWN6 122 aa6.49□□□□□ -1.37
SCN8A-201ENST00000354534 CRYGSP22914 178 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 CTHRC1Q96CG8 243 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MESP1Q9BRJ9 268 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 UPK3BQ9BT76 320 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 SERP1Q9Y6X1 66 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 TCF20Q9UGU0 1960 aaKnown RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 USMG5Q96IX5 58 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MBD3L4A6NDZ8 208 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MBD3L3A6NE82 208 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MBD3L5A6NJ08 208 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 GATA4P43694 442 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 MBD3L2Q8NHZ7 208 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 Q6ZQT7 251 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 SLC25A29Q8N8R3 303 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 NDUFV3P56181 108 aaKnown RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 TMEM200BQ69YZ2 307 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 TEN1Q86WV5 123 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 IGHV1-3A0A0C4DH29 117 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 LYPD3O95274 346 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 LY6DQ14210 128 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 Q86TA4 180 aa6.48□□□□□ -1.37
SCN8A-201ENST00000354534 OPRPNQ99935 248 aaPredicted RBP6.48□□□□□ -1.37
SCN8A-201ENST00000354534 APOC4P55056 127 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 SIGLEC8Q9NYZ4 499 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 FOXI1Q12951 378 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 CYTL1Q9NRR1 136 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 PSPNO60542 156 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 Q6ZVH6 145 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 ZMAT4Q9H898 229 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 NCR3O14931 201 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 LINC01620Q4KN68 170 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 IGKV1D-43A0A0B4J1Z2 117 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 H3BUX3 64 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 BTCP35070 178 aa6.47□□□□□ -1.37
SCN8A-201ENST00000354534 COL5A3P25940 1745 aaPredicted RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms