RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 Q6AWC8 147 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 AMN1Q8IY45 258 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 LINC01356Q8N9X3 169 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 OR8A1Q8NGG7 326 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 OOSP1A8MZH6 123 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 SAPCD1Q5SSQ6 148 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 CCDC144NLQ6NUI1 221 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 IGHV7-81A0A0B4J1V7 117 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 WI2-2373I1.2A0A1W2PRP0 233 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 C7orf71A4D174 169 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 CT45A10P0DMU9 189 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 RPS20P60866 119 aaKnown RBP6.65□□□□□ -1.34
TRIM55-204ENST00000353317 OCIAD2Q56VL3 154 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 FAM104BQ5XKR9 115 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 U3KQK5 164 aa6.65□□□□□ -1.34
TRIM55-204ENST00000353317 FLNBO75369 2602 aaKnown RBP6.65□□□□□ -1.35
TRIM55-204ENST00000353317 GAGE12BA1L429 117 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 TCTAP57738 103 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 Q6ZS46 218 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 PRELID3AQ96N28 172 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 SRSF8Q9BRL6 282 aaKnown RBP6.64□□□□□ -1.35
TRIM55-204ENST00000353317 MEGF9Q9H1U4 602 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 TMEM189A5PLL7 270 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 SH2D1AO60880 128 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 PPBPP02775 128 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 LY6EQ16553 131 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 TMEM97Q5BJF2 176 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 ORMDL3Q8N138 153 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 TMEM190Q8WZ59 177 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 PEF1Q9UBV8 284 aaKnown RBP6.64□□□□□ -1.35
TRIM55-204ENST00000353317 RABAC1Q9UI14 185 aa6.64□□□□□ -1.35
TRIM55-204ENST00000353317 F8W735 103 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 GNG7O60262 68 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 CACNG7P62955 275 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 PDE6HQ13956 83 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 ZNF562Q6V9R5 426 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 AAMDCQ9H7C9 122 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 IGKV2-40A0A087WW87 121 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 SMKR1H3BMG3 65 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 SMAD7O15105 426 aaKnown RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 IGKV2D-40P01614 121 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 SEC11AP67812 179 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 LGALS9BQ3B8N2 356 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 LGALS9CQ6DKI2 356 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 PRSS57Q6UWY2 283 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 DPF1Q92782 380 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 FANCD2OSQ96PS1 177 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 H3BUX3 64 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 FSHBP01225 129 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 ZNF80P51504 273 aaPredicted RBP6.63□□□□□ -1.35
TRIM55-204ENST00000353317 DEFB112Q30KQ8 113 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 IL17RELQ6ZVW7 336 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 C5orf56Q8N8D9 126 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 PRR25Q96S07 402 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 LINC00527Q9UJ94 153 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 SELENOKQ9Y6D0 94 aa6.63□□□□□ -1.35
TRIM55-204ENST00000353317 G3V318 75 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 NPYP01303 97 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 HBDP02042 147 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 KRTAP1-1Q07627 177 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 OR1N2Q8NGR9 330 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 Q8TAT8 98 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 ZNF48Q96MX3 618 aaPredicted RBP6.62□□□□□ -1.35
TRIM55-204ENST00000353317 IGLV11-55A0A075B6I3 123 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 NPIPB5A8MRT5 1133 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 IGHV3-23P01764 117 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 CKS2P33552 79 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 BLCAPP62952 87 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 IGFL4Q6B9Z1 124 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 COX8CQ7Z4L0 72 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 ARPC1AQ92747 370 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 THYN1Q9P016 225 aa6.62□□□□□ -1.35
TRIM55-204ENST00000353317 ATP6V0E1O15342 81 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 GATA3P23771 443 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 TWIST1Q15672 202 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 ADAMTSL5Q6ZMM2 481 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 WFDC3Q8IUB2 231 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 IFI27L1Q96BM0 104 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 JMJD8Q96S16 334 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 VGLL1Q99990 258 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 A6NDX4 124 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 GAS8-AS1O95177 125 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 IGHV4-59P01825 116 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 IGHG4P01861 327 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 HLA-DMBP28068 263 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 MFAP4P55083 255 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 COTL1Q14019 142 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 PCP2Q8IVA1 136 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 NAA38Q9BRA0 125 aaKnown RBP6.61□□□□□ -1.35
TRIM55-204ENST00000353317 MSRB1Q9NZV6 116 aa6.61□□□□□ -1.35
TRIM55-204ENST00000353317 HIVEP1P15822 2718 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 SETD2Q9BYW2 2564 aaPredicted RBP6.6□□□□□ -1.35
TRIM55-204ENST00000353317 IGLC6P0CF74 106 aa6.6□□□□□ -1.35
TRIM55-204ENST00000353317 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms