RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 FAM181BA6NEQ2 426 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 K7EMT4 169 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 M0QZ24 198 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 HOXA3O43365 443 aaPredicted RBP15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 FAM106AQ4KMX7 169 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 FAM104BQ5XKR9 115 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 REC114Q7Z4M0 266 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 CNFNQ9BYD5 112 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 LENEPQ9Y5L5 61 aa15.48■□□□□ 0.07
CHRNA3-202ENST00000348639 PRRC2AP48634 2157 aaKnown RBP15.47■□□□□ 0.07
CHRNA3-202ENST00000348639 TDRG1Q3Y452 100 aa15.47■□□□□ 0.07
CHRNA3-202ENST00000348639 SMPXQ9UHP9 88 aa15.47■□□□□ 0.07
CHRNA3-202ENST00000348639 SSTP61278 116 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 WFDC11Q8NEX6 87 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 MUC21A0A0G2JKD1 596 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 MUC21A0A140T8X8 626 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 OVOL1O14753 267 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 TWIST1Q15672 202 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 MUC21Q5SSG8 566 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 LINC00477Q96M19 166 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 NDUFAF3Q9BU61 184 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 VAMP8Q9BV40 100 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 U3KQK5 164 aa15.46■□□□□ 0.07
CHRNA3-202ENST00000348639 IGKV3D-20A0A0C4DH25 116 aa15.45■□□□□ 0.06
CHRNA3-202ENST00000348639 RPL11P62913 178 aaKnown RBP15.45■□□□□ 0.06
CHRNA3-202ENST00000348639 DUX5Q96PT3 197 aa15.45■□□□□ 0.06
CHRNA3-202ENST00000348639 GCN1Q92616 2671 aaKnown RBP15.45■□□□□ 0.06
CHRNA3-202ENST00000348639 IGHV1-24A0A0C4DH33 117 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 RAB4AP20338 218 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 EBLN2Q6P2I7 272 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 AMN1Q8IY45 258 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 C20orf144Q9BQM9 153 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 ZNF702PQ9H963 129 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 C11orf21Q9P2W6 132 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 C2orf70A6NJV1 201 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 OR10J6PQ8NGY7 276 aa15.44■□□□□ 0.06
CHRNA3-202ENST00000348639 BTF3P20290 206 aaKnown RBP15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 PMCHL1Q16048 86 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 UFC1Q9Y3C8 167 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 SELENOKQ9Y6D0 94 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 IGKV3-7A0A075B6H7 116 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 D6R8Y8 96 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 RPLP1P05386 114 aaKnown RBP15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 FOXE3Q13461 319 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 TMEM191AQ9H0A3 160 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 PAM16Q9Y3D7 125 aa15.43■□□□□ 0.06
CHRNA3-202ENST00000348639 CSN3P07498 182 aa15.42■□□□□ 0.06
CHRNA3-202ENST00000348639 ELANEP08246 267 aa15.42■□□□□ 0.06
CHRNA3-202ENST00000348639 MRPL51Q4U2R6 128 aaKnown RBP15.42■□□□□ 0.06
CHRNA3-202ENST00000348639 ORMDL3Q8N138 153 aa15.42■□□□□ 0.06
CHRNA3-202ENST00000348639 ITPR3Q14573 2671 aa15.42■□□□□ 0.06
CHRNA3-202ENST00000348639 OR5AL1P0C617 328 aa15.41■□□□□ 0.06
CHRNA3-202ENST00000348639 MYOZ3Q8TDC0 251 aa15.41■□□□□ 0.06
CHRNA3-202ENST00000348639 PRELID3AQ96N28 172 aa15.41■□□□□ 0.06
CHRNA3-202ENST00000348639 MSRB1Q9NZV6 116 aa15.4■□□□□ 0.06
CHRNA3-202ENST00000348639 LEPROTL1O95214 131 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 EDN2P20800 178 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 PRR9Q5T870 116 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 PRSS3P2Q8NHM4 247 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 AP5S1Q9NUS5 200 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 CCDC168Q8NDH2 2452 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 TLN2Q9Y4G6 2542 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 SAMD13Q5VXD3 122 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 ZFAND2AQ8N6M9 145 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 OR8A1Q8NGG7 326 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 TMEM70Q9BUB7 260 aa15.39■□□□□ 0.05
CHRNA3-202ENST00000348639 LGALS1P09382 135 aaKnown RBP15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 FA2HQ7L5A8 372 aa15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 RNF152Q8N8N0 203 aa15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 FAM19A4Q96LR4 140 aa15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 CRXO43186 299 aaPredicted RBP15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 Q6ZQT7 251 aa15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 UBE2E2Q96LR5 201 aa15.38■□□□□ 0.05
CHRNA3-202ENST00000348639 FASNP49327 2511 aaKnown RBP15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 TRBV7-9A0A0J9YWB2 115 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 SRD5A1P18405 259 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 CKS2P33552 79 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 DEFB1P60022 68 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 DCANP1Q8TF63 244 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 RNF185Q96GF1 192 aa15.37■□□□□ 0.05
CHRNA3-202ENST00000348639 ID1P41134 155 aa15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 Q8N2B8 174 aa15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 MIEN1Q9BRT3 115 aa15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 SIGLEC8Q9NYZ4 499 aa15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 IFI27P40305 119 aaPredicted RBP15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 LINC00173Q6ZV60 143 aa15.36■□□□□ 0.05
CHRNA3-202ENST00000348639 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
CHRNA3-202ENST00000348639 F6UB75 175 aa15.35■□□□□ 0.05
CHRNA3-202ENST00000348639 PPBPP02775 128 aa15.35■□□□□ 0.05
CHRNA3-202ENST00000348639 SPATA45Q537H7 98 aa15.35■□□□□ 0.05
CHRNA3-202ENST00000348639 HSPB8Q9UJY1 196 aa15.35■□□□□ 0.05
CHRNA3-202ENST00000348639 SYS1-DBNDD2H3BUS1 97 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 LGALS9O00182 355 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 SNAI2O43623 268 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 APRG1Q8IVJ8 170 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 LOC389332A0A1B0GUA5 103 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 SPATA12Q7Z6I5 190 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 OR10AG1Q8NH19 301 aa15.34■□□□□ 0.05
CHRNA3-202ENST00000348639 FLNAP21333 2647 aaKnown RBP15.33■□□□□ 0.05
CHRNA3-202ENST00000348639 IGHV4-4A0A075B6R2 117 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms