RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 IGHV4-38-2P0DP08 117 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 FAM104BQ5XKR9 115 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 DEFB104AQ8WTQ1 72 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 CHCHD1Q96BP2 118 aaKnown RBP4.63□□□□□ -1.67
CLCN3-201ENST00000347613 AGPAT4-IT1Q9H0P7 198 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 TNFRSF18Q9Y5U5 241 aa4.63□□□□□ -1.67
CLCN3-201ENST00000347613 AGRNO00468 2067 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 SORL1Q92673 2214 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 TMEM189A5PLL7 270 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 K7EMI3 77 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 FGF6P10767 208 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 ZNF48Q96MX3 618 aaPredicted RBP4.62□□□□□ -1.67
CLCN3-201ENST00000347613 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 ANKRD17O75179 2603 aaKnown RBP4.62□□□□□ -1.67
CLCN3-201ENST00000347613 F8WDY8 70 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 LINC01545Q5VT33 79 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 HIST2H2BDQ6DRA6 164 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 C10orf99Q6UWK7 81 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 S100A7AQ86SG5 101 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 LYPD1Q8N2G4 141 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 C5orf56Q8N8D9 126 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 DKK2Q9UBU2 259 aa4.62□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV4-61A0A0C4DH41 118 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 K7EP13 123 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 M0QZK8 103 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 TAX1BP3O14907 124 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 CEACAM3P40198 252 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 TWIST1Q15672 202 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 C19orf54Q5BKX5 351 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 COL5A1-AS1Q5SY13 56 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 FAM162BQ5T6X4 162 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 COX8CQ7Z4L0 72 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 OR8A1Q8NGG7 326 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 MRPS16Q9Y3D3 137 aaKnown RBP4.61□□□□□ -1.67
CLCN3-201ENST00000347613 DOPEY1Q5JWR5 2465 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 F6UB75 175 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 NUDT3O95989 172 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 ID1P41134 155 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 UBE2E1P51965 193 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 BLCAPP62952 87 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 OR10AG1Q8NH19 301 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 C18orf15Q96N68 181 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 RABAC1Q9UI14 185 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 IGKV2D-26A0A0A0MRZ7 120 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV7-4-1A0A0J9YVY3 117 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 BVES-AS1Q5T3Y7 98 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 PRELID3AQ96N28 172 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 FAM110AQ9BQ89 295 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 AP5S1Q9NUS5 200 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 LRRK2Q5S007 2527 aa4.61□□□□□ -1.67
CLCN3-201ENST00000347613 ORM1P02763 201 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 GAGE1Q13065 139 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 PDE6HQ13956 83 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 LY6EQ16553 131 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 PCP2Q8IVA1 136 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 PRSS3P2Q8NHM4 247 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 FAM110DQ8TAY7 271 aaPredicted RBP4.6□□□□□ -1.67
CLCN3-201ENST00000347613 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
CLCN3-201ENST00000347613 AAMDCQ9H7C9 122 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 ZNF462Q96JM2 2506 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 NPFFO15130 113 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV3-11P01762 117 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 PTTG1IPP53801 180 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 COX11Q9Y6N1 276 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 ANK3Q12955 4377 aaKnown RBP4.6□□□□□ -1.67
CLCN3-201ENST00000347613 TRAV30A0A087WSZ9 112 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 OR5AL1P0C617 328 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 SRD5A1P18405 259 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 CACNG7P62955 275 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 RIGQ13278 110 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 FER1L6-AS1Q8NA97 138 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 C1orf43Q9BWL3 253 aa4.6□□□□□ -1.67
CLCN3-201ENST00000347613 IGKV3-7A0A075B6H7 116 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 IGLV2-18A0A075B6J9 118 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 EFNA4P52798 201 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 MINOS1Q5TGZ0 78 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 MAP1LC3CQ9BXW4 147 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 MINOS1-NBL1R4GNA1 71 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 TRAV8-6A0A0B4J262 113 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 TRAV40A0A0B4J280 105 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 RPL7P18124 248 aaKnown RBP4.59□□□□□ -1.67
CLCN3-201ENST00000347613 KLK9Q2XQG4 91 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 MRPL52Q86TS9 123 aaKnown RBP4.59□□□□□ -1.67
CLCN3-201ENST00000347613 MAPK1IP1LQ8NDC0 245 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 PRORYQ9H606 182 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 KLK9Q9UKQ9 250 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 U3KQE9 123 aa4.59□□□□□ -1.67
CLCN3-201ENST00000347613 SETXQ7Z333 2677 aaKnown RBP4.59□□□□□ -1.67
CLCN3-201ENST00000347613 IGHV4-30-2A0A087WSY4 118 aa4.59□□□□□ -1.68
CLCN3-201ENST00000347613 PSG9Q00887 426 aa4.59□□□□□ -1.68
CLCN3-201ENST00000347613 CBY3A6NI87 242 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 RNF223E7ERA6 249 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CKS2P33552 79 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 CCDC144NLQ6NUI1 221 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 PET117Q6UWS5 81 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 ORMDL3Q8N138 153 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 KLHDC1Q8N7A1 406 aa4.58□□□□□ -1.68
CLCN3-201ENST00000347613 HHLA3Q9XRX5 114 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms