RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 Q6ZQT7 251 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 PRO1854Q9UHT4 67 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 POLR3KQ9Y2Y1 108 aaPredicted RBP18.24■□□□□ 0.51
NPAS3-201ENST00000346562 J3QQQ9 107 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF124Q15973 351 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 C9orf118A6NHY6 69 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 F8VRH5 84 aa18.24■□□□□ 0.51
NPAS3-201ENST00000346562 RNF152Q8N8N0 203 aa18.23■□□□□ 0.51
NPAS3-201ENST00000346562 CRYGCP07315 174 aa18.23■□□□□ 0.51
NPAS3-201ENST00000346562 ADCYAP1P18509 176 aa18.23■□□□□ 0.51
NPAS3-201ENST00000346562 Q9HAA7 133 aa18.23■□□□□ 0.51
NPAS3-201ENST00000346562 SH2D6Q7Z4S9 175 aa18.23■□□□□ 0.51
NPAS3-201ENST00000346562 MRPL35Q9NZE8 188 aaKnown RBP18.22■□□□□ 0.51
NPAS3-201ENST00000346562 CARD19Q96LW7 228 aa18.22■□□□□ 0.51
NPAS3-201ENST00000346562 CEND1Q8N111 149 aa18.22■□□□□ 0.51
NPAS3-201ENST00000346562 C20orf144Q9BQM9 153 aa18.22■□□□□ 0.51
NPAS3-201ENST00000346562 LTAP01374 205 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 CCL18P55774 89 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF726P1Q15940 193 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 BOD1L2Q8IYS8 172 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 SLC25A29Q8N8R3 303 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF493Q6ZR52 646 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 ZNF491Q8N8L2 437 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 GP9P14770 177 aa18.21■□□□□ 0.51
NPAS3-201ENST00000346562 RNASE13Q5GAN3 156 aaKnown RBP18.21■□□□□ 0.51
NPAS3-201ENST00000346562 AHCTF1Q8WYP5 2266 aa18.2■□□□□ 0.5
NPAS3-201ENST00000346562 COX8AP10176 69 aa18.2■□□□□ 0.5
NPAS3-201ENST00000346562 F8W1H4 67 aa18.2■□□□□ 0.5
NPAS3-201ENST00000346562 K7EMI3 77 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 TIRAPP58753 221 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 HERV-K104P63124 156 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 PIFOQ8TCI5 191 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 LENEPQ9Y5L5 61 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 ZSWIM8A7E2V4 1837 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 BUB3O43684 328 aa18.19■□□□□ 0.5
NPAS3-201ENST00000346562 ETDCA0A1B0GVM5 59 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 MRPL23Q16540 153 aaKnown RBP18.18■□□□□ 0.5
NPAS3-201ENST00000346562 COL4A6Q14031 1691 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 SPART-AS1P0CW21 52 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 BVES-AS1Q5T3Y7 98 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 DEFB105AQ8NG35 78 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 PLXNA3P51805 1871 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 POU2AF1Q16633 256 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 ZNF503Q96F45 646 aa18.18■□□□□ 0.5
NPAS3-201ENST00000346562 CACNA1IQ9P0X4 2223 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 GNRH2O43555 120 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 HLA-DMBP28068 263 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 DYNAPQ8N1N2 210 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 SLX1AQ9BQ83 275 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 KLF2Q9Y5W3 355 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-201ENST00000346562 SPTA1P02549 2419 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 ATP5G1P05496 136 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 IGLV2-23P01705 113 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 DEFB136Q30KP8 78 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 C1orf147Q96MC9 270 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-201ENST00000346562 ESPL1Q14674 2120 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-201ENST00000346562 TRAV12-1A0A0B4J245 112 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 IGKV2-29A2NJV5 120 aaPredicted RBP18.17■□□□□ 0.5
NPAS3-201ENST00000346562 K7EQD1 137 aa18.17■□□□□ 0.5
NPAS3-201ENST00000346562 ORMDL1Q9P0S3 153 aa18.16■□□□□ 0.5
NPAS3-201ENST00000346562 F6UB75 175 aa18.16■□□□□ 0.5
NPAS3-201ENST00000346562 SLURP1P55000 103 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 CENPVL3A0A0U1RRI6 287 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 TINCRA0A1B0GVN0 87 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 KIF26BQ2KJY2 2108 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 C11orf52Q96A22 123 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 CAMK2N2Q96S95 79 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 APRG1Q8IVJ8 170 aa18.15■□□□□ 0.5
NPAS3-201ENST00000346562 FREM3P0C091 2139 aa18.14■□□□□ 0.49
NPAS3-201ENST00000346562 ANK1P16157 1881 aa18.14■□□□□ 0.49
NPAS3-201ENST00000346562 GYPEP15421 78 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 TRIOBPQ9H2D6 2365 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 K7EP34 96 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 NPBQ8NG41 125 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 CTSZQ9UBR2 303 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 WISP1O95388 367 aa18.13■□□□□ 0.49
NPAS3-201ENST00000346562 Q9H8V8 135 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 NDUFS7O75251 213 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 TRACP01848 142 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 ATP6V0E2Q8NHE4 81 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 IGLC7A0M8Q6 106 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 SIVA1O15304 175 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 AGPAT4-IT1Q9H0P7 198 aa18.12■□□□□ 0.49
NPAS3-201ENST00000346562 SIP14410 1827 aa18.11■□□□□ 0.49
NPAS3-201ENST00000346562 MRPL36Q9P0J6 103 aaKnown RBP18.11■□□□□ 0.49
NPAS3-201ENST00000346562 ZNF318Q5VUA4 2279 aa18.11■□□□□ 0.49
NPAS3-201ENST00000346562 IGHV4-61A0A0C4DH41 118 aa18.11■□□□□ 0.49
NPAS3-201ENST00000346562 FUSP35637 526 aaKnown RBP eCLIP18.11■□□□□ 0.49
NPAS3-201ENST00000346562 IGLC2P0DOY2 106 aa18.11■□□□□ 0.49
NPAS3-201ENST00000346562 IGLC3P0DOY3 106 aa18.11■□□□□ 0.49
NPAS3-201ENST00000346562 TICRRQ7Z2Z1 1910 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 C9JQL5 133 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 F8W735 103 aaPredicted RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 C17orf77Q96MU5 243 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 GRNP28799 593 aaKnown RBP18.1■□□□□ 0.49
NPAS3-201ENST00000346562 PRR20EP86478 221 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 PRR20CP86479 221 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 PRR20DP86480 221 aa18.1■□□□□ 0.49
NPAS3-201ENST00000346562 PRR20BP86481 221 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms