RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 PGPA6NDG6 321 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 HOXA5P20719 270 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 RAB2AP61019 212 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 SLAQ13239 276 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 PRR9Q5T870 116 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 KLF12Q9Y4X4 402 aa13.97□□□□□ -0.17
CEACAM3-201ENST00000344550 TRGV1A0A0A0MS02 117 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 PRSS29PA6NIE9 313 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 STAG3L2P0CL84 134 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 STAG3L3P0CL85 134 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 CDC34P49427 236 aaPredicted RBP13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 ZNF415Q09FC8 603 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 C1orf134Q5TEV5 83 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 Q8TAT8 98 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 SUN5Q8TC36 379 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 ST6GAL2Q96JF0 529 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 TNFSF18Q9UNG2 199 aa13.96□□□□□ -0.17
CEACAM3-201ENST00000344550 A0A1B0GVY2 172 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 TDRG1Q3Y452 100 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 HSD17B11Q8NBQ5 300 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 UPK3BQ9BT76 320 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 TMPRSS5Q9H3S3 457 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 LINC00588Q9Y4M8 146 aa13.95□□□□□ -0.18
CEACAM3-201ENST00000344550 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 ATP6V0CP27449 155 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 RGS21Q2M5E4 152 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 SSX7Q7RTT5 188 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 HYLS1Q96M11 299 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 SPXQ9BT56 116 aa13.94□□□□□ -0.18
CEACAM3-201ENST00000344550 TRGV11A0A075B6L2 103 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 BORCS7-ASMTA0A0B4J1R7 106 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 ARL14EPLP0DKL9 152 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 FAM159AQ6UWV7 190 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 RAB24Q969Q5 203 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 TMEM167BQ9NRX6 74 aa13.93□□□□□ -0.18
CEACAM3-201ENST00000344550 MUC4Q99102 2169 aa13.92□□□□□ -0.18
CEACAM3-201ENST00000344550 FBLL1A6NHQ2 334 aaKnown RBP13.92□□□□□ -0.18
CEACAM3-201ENST00000344550 K7EQM0 130 aa13.92□□□□□ -0.18
CEACAM3-201ENST00000344550 C5orf17Q8NAS9 161 aa13.92□□□□□ -0.18
CEACAM3-201ENST00000344550 ACTR3CQ9C0K3 210 aaPredicted RBP13.92□□□□□ -0.18
CEACAM3-201ENST00000344550 TRAV21A0A0B4J279 112 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 CXorf1O96002 111 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 Q5BKY6 102 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 TTC32Q5I0X7 151 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 GOLT1AQ6ZVE7 132 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 OR2T35Q8NGX2 323 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 RASL10AQ92737 203 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 Q9H8V8 135 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 PRO0255Q9UI72 69 aa13.91□□□□□ -0.18
CEACAM3-201ENST00000344550 A0A0J9YY99 117 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 A0A1W2PPQ1 181 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 RNF222A6NCQ9 220 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 TAAR5O14804 337 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 GCHFRP30047 84 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 IQCF2Q8IXL9 164 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 VSIG2Q96IQ7 327 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 NDFIP1Q9BT67 221 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 MRPS16Q9Y3D3 137 aaKnown RBP13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 DNAH2Q9P225 4427 aa13.9□□□□□ -0.18
CEACAM3-201ENST00000344550 Q6ZQT7 251 aa13.89□□□□□ -0.19
CEACAM3-201ENST00000344550 KCNS1Q96KK3 526 aa13.89□□□□□ -0.19
CEACAM3-201ENST00000344550 TREM1Q9NP99 234 aa13.89□□□□□ -0.19
CEACAM3-201ENST00000344550 FAT2Q9NYQ8 4349 aa13.89□□□□□ -0.19
CEACAM3-201ENST00000344550 DNAH17Q9UFH2 4485 aa13.88□□□□□ -0.19
CEACAM3-201ENST00000344550 FXYD6-FXYD2A0A087WZ82 144 aa13.88□□□□□ -0.19
CEACAM3-201ENST00000344550 HMGB3O15347 200 aaKnown RBP13.88□□□□□ -0.19
CEACAM3-201ENST00000344550 ESRGQ1W209 222 aa13.88□□□□□ -0.19
CEACAM3-201ENST00000344550 C6orf223Q8N319 242 aa13.88□□□□□ -0.19
CEACAM3-201ENST00000344550 A0A096LPF7 62 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 A0A1W2PRE2 83 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 PAX4O43316 350 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 EIF3GO75821 320 aaKnown RBP eCLIP13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 TCRAP04437 139 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 MUC21Q5SSG8 566 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 RPL7L1Q6DKI1 246 aaKnown RBP13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 NKX6-2Q9C056 277 aaPredicted RBP13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 MRPL16Q9NX20 251 aaKnown RBP13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 HHLA3Q9XRX5 114 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 ICOSQ9Y6W8 199 aa13.87□□□□□ -0.19
CEACAM3-201ENST00000344550 TMEM183BQ1AE95 376 aa13.86□□□□□ -0.19
CEACAM3-201ENST00000344550 TMEM183AQ8IXX5 376 aa13.86□□□□□ -0.19
CEACAM3-201ENST00000344550 SH3BGRL3Q9H299 93 aa13.86□□□□□ -0.19
CEACAM3-201ENST00000344550 EPDR1Q9UM22 224 aa13.86□□□□□ -0.19
CEACAM3-201ENST00000344550 RPH3ALQ9UNE2 315 aa13.86□□□□□ -0.19
CEACAM3-201ENST00000344550 CRYBA4P53673 196 aa13.85□□□□□ -0.19
CEACAM3-201ENST00000344550 FHL2Q14192 279 aa13.85□□□□□ -0.19
CEACAM3-201ENST00000344550 MRPL23Q16540 153 aaKnown RBP13.85□□□□□ -0.19
CEACAM3-201ENST00000344550 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
CEACAM3-201ENST00000344550 SDF2L1Q9HCN8 221 aa13.85□□□□□ -0.19
CEACAM3-201ENST00000344550 TRAV8-1A0A0A6YYK1 113 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 CTXND1A0A1B0GTU2 59 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 M0R2P5 195 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 SUMO1P63165 101 aaKnown RBP13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 SAPCD1Q5SSQ6 148 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 TMEM75Q8N9X5 138 aa13.84□□□□□ -0.19
CEACAM3-201ENST00000344550 IGHV3-16A0A0C4DH30 117 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms