RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 OR10G4Q8NGN3 311 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 ZNF492Q9P255 531 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 VPS13DQ5THJ4 4388 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 TRBV7-9A0A0J9YWB2 115 aa11.34□□□□□ -0.59
ATG4B-201ENST00000344376 RBAKDNA6NC62 111 aa11.34□□□□□ -0.59
ATG4B-201ENST00000344376 ZNF138P52744 262 aa11.34□□□□□ -0.59
ATG4B-201ENST00000344376 RAB2AP61019 212 aa11.34□□□□□ -0.59
ATG4B-201ENST00000344376 BTN1A1Q13410 526 aa11.34□□□□□ -0.59
ATG4B-201ENST00000344376 SEC11BP0C7V7 166 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 OR2G3Q8NGZ4 309 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 TMED6Q8WW62 240 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 LINC00467Q9BRT7 94 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 PSMG3Q9BT73 122 aaPredicted RBP11.33□□□□□ -0.6
ATG4B-201ENST00000344376 OTORQ9NRC9 128 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 MBP02144 154 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 SULT1A2P50226 295 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 RNF212Q495C1 297 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 ZFAND2AQ8N6M9 145 aa11.33□□□□□ -0.6
ATG4B-201ENST00000344376 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-201ENST00000344376 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
ATG4B-201ENST00000344376 GAGE7O76087 117 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 GAGE12FP0CL80 117 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 GAGE12GP0CL81 117 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 GAGE12IP0CL82 117 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 CDC34P49427 236 aaPredicted RBP11.32□□□□□ -0.6
ATG4B-201ENST00000344376 RAB5CP51148 216 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 BLOC1S1P78537 153 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 DAZ2Q13117 558 aaKnown RBP11.32□□□□□ -0.6
ATG4B-201ENST00000344376 LINC00612Q8N6U2 182 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 Q8TAT8 98 aa11.32□□□□□ -0.6
ATG4B-201ENST00000344376 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 DIRC3C9JPN6 131 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 ATP6V0CP27449 155 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 SERF2P84101 59 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 ATG101Q9BSB4 218 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 BIRC6Q9NR09 4857 aa11.31□□□□□ -0.6
ATG4B-201ENST00000344376 PGPA6NDG6 321 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 TEX46H3BTG2 121 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 NUDT3O95989 172 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 LENEPQ9Y5L5 61 aa11.3□□□□□ -0.6
ATG4B-201ENST00000344376 IGHV1OR15-1A0A075B7D0 117 aa11.29□□□□□ -0.6
ATG4B-201ENST00000344376 HMGB3O15347 200 aaKnown RBP11.29□□□□□ -0.6
ATG4B-201ENST00000344376 ARL14EPLP0DKL9 152 aa11.29□□□□□ -0.6
ATG4B-201ENST00000344376 OR5I1Q13606 314 aa11.29□□□□□ -0.6
ATG4B-201ENST00000344376 PRR9Q5T870 116 aa11.29□□□□□ -0.6
ATG4B-201ENST00000344376 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
ATG4B-201ENST00000344376 GNPNAT1Q96EK6 184 aaPredicted RBP11.29□□□□□ -0.6
ATG4B-201ENST00000344376 STAG3L2P0CL84 134 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 STAG3L3P0CL85 134 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 FAM3BP58499 235 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-201ENST00000344376 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
ATG4B-201ENST00000344376 C11orf72Q8NBR9 251 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 RAB24Q969Q5 203 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 TRGV2A0A075B6R0 118 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 TRGV1A0A0A0MS02 117 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 TCL1AP56279 114 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 Q6ZTI0 123 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 ACTR3CQ9C0K3 210 aaPredicted RBP11.28□□□□□ -0.6
ATG4B-201ENST00000344376 SH3BGRL3Q9H299 93 aa11.28□□□□□ -0.6
ATG4B-201ENST00000344376 UMAD1C9J7I0 102 aa11.27□□□□□ -0.61
ATG4B-201ENST00000344376 LGALS9BQ3B8N2 356 aa11.27□□□□□ -0.61
ATG4B-201ENST00000344376 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
ATG4B-201ENST00000344376 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.61
ATG4B-201ENST00000344376 TRAV26-1A0A087WT03 109 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 M0R2N4 97 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 CXorf1O96002 111 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 GCHFRP30047 84 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 CCL18P55774 89 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 ZNF415Q09FC8 603 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 TMPRSS5Q9H3S3 457 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
ATG4B-201ENST00000344376 IGLV2-18A0A075B6J9 118 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 SERTM2A0A1B0GWG4 89 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 Q6AWC8 147 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 LINC00336Q6ZUF6 198 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 TP53TG3Q9ULZ0 132 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 KLF12Q9Y4X4 402 aa11.25□□□□□ -0.61
ATG4B-201ENST00000344376 K7EQM0 130 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 SPINK4O60575 86 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 MUC21Q5SSG8 566 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 DPPA3Q6W0C5 159 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
ATG4B-201ENST00000344376 C5orf17Q8NAS9 161 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 TRGV11A0A075B6L2 103 aa11.24□□□□□ -0.61
ATG4B-201ENST00000344376 A0A0J9YY99 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms