RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PRB1P04280 392 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 PRSS57Q6UWY2 283 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 Q6ZS46 218 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 U3KQK5 164 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 A0A096LNJ9 63 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 BLCAPP62952 87 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 C19orf54Q5BKX5 351 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
VIPAS39-202ENST00000343765 IGKV3-7A0A075B6H7 116 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 IGKV3D-20A0A0C4DH25 116 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 SMAD7O15105 426 aaKnown RBP11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 KLK15Q9H2R5 256 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 DEFB1P60022 68 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 FOXE3Q13461 319 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 Q6ZVH6 145 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 WFDC3Q8IUB2 231 aa11.4□□□□□ -0.58
VIPAS39-202ENST00000343765 MXRA5Q9NR99 2828 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 RBAKDNA6NC62 111 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 PF4V1P10720 104 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 EVI2AP22794 236 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 TCTAP57738 103 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 MRPS16Q9Y3D3 137 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 U3KQE9 123 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 NPSP0C0P6 89 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 RPL11P62913 178 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 ZNF738Q8NE65 137 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 C20orf173Q96LM9 149 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 MEGF9Q9H1U4 602 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 MSMBP08118 114 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 LINC01545Q5VT33 79 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 HIF1ANQ9NWT6 349 aa11.39□□□□□ -0.59
VIPAS39-202ENST00000343765 DLEU1O43261 78 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 GATA1P15976 413 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 ZNF469Q96JG9 3925 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 AVPP01185 164 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 IGF1P05019 195 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 DMRTA1Q5VZB9 504 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 GLMPQ8WWB7 406 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 PSMG3-AS1Q96PY0 264 aa11.38□□□□□ -0.59
VIPAS39-202ENST00000343765 NDUFS8O00217 210 aa11.37□□□□□ -0.59
VIPAS39-202ENST00000343765 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-202ENST00000343765 SLC25A34Q6PIV7 304 aa11.37□□□□□ -0.59
VIPAS39-202ENST00000343765 A6NDX4 124 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 SNAI2O43623 268 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 TMEM95Q3KNT9 176 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 PRR9Q5T870 116 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 UFC1Q9Y3C8 167 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 IGHG2P01859 326 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 HBDP02042 147 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 CACNG7P62955 275 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 CYB5R2Q6BCY4 276 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 C18orf15Q96N68 181 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
VIPAS39-202ENST00000343765 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 OR4X2Q8NGF9 303 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 CNFNQ9BYD5 112 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 MAP1LC3AQ9H492 121 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 GOLT1BQ9Y3E0 138 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 SPRY2O43597 315 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 TCF21O43680 179 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 C9orf47Q6ZRZ4 202 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 GPHB5Q86YW7 130 aa11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 MRPL53Q96EL3 112 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-202ENST00000343765 TEX15Q9BXT5 2789 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 MAPK1IP1LQ8NDC0 245 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 TRAV26-2A0A0B4J265 109 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 NDUFA4O00483 81 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 TNFRSF6BO95407 300 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 SRD5A1P18405 259 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 C9orf139Q6ZV77 190 aa11.34□□□□□ -0.59
VIPAS39-202ENST00000343765 F6UB75 175 aa11.33□□□□□ -0.59
VIPAS39-202ENST00000343765 H3BVH4 76 aa11.33□□□□□ -0.59
VIPAS39-202ENST00000343765 TM4SF20Q53R12 229 aa11.33□□□□□ -0.59
VIPAS39-202ENST00000343765 IGHV7-4-1A0A0J9YVY3 117 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 NUDT3O95989 172 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 ZNF124Q15973 351 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 EDN2P20800 178 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 IFI27L1Q96BM0 104 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 USMG5Q96IX5 58 aa11.33□□□□□ -0.6
VIPAS39-202ENST00000343765 ERASQ7Z444 233 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 B4DSR2 109 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 LEPP41159 167 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 ANKRD39Q53RE8 183 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 MS4A6AQ9H2W1 248 aa11.32□□□□□ -0.6
VIPAS39-202ENST00000343765 PPBPP02775 128 aa11.31□□□□□ -0.6
VIPAS39-202ENST00000343765 SONP18583 2426 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-202ENST00000343765 SMIM15Q7Z3B0 74 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms