RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 NDPQ00604 133 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 PRB3Q04118 309 aaPredicted RBP3.79□□□□□ -1.8
CSMD3-203ENST00000343508 LY6G5BQ8NDX9 201 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 C5orf42Q9H799 3197 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 IGHV3OR16-12A0A075B7B8 117 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TRAV26-2A0A0B4J265 109 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 TMEM126AQ9H061 195 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 DAZ1Q9NQZ3 744 aaKnown RBP3.79□□□□□ -1.8
CSMD3-203ENST00000343508 SRD5A1P18405 259 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 LINC01560Q8TB33 94 aa3.79□□□□□ -1.8
CSMD3-203ENST00000343508 SZT2Q5T011 3432 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 DUX4L9Q6RFH8 374 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-203ENST00000343508 CCL19Q99731 98 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 CD59P13987 128 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE12JA6NER3 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 FCN3O75636 299 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE7O76087 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE12FP0CL80 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE12GP0CL81 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE12IP0CL82 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 TCF15Q12870 199 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 GAGE4Q13068 117 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF407Q9C0G0 2248 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 PRB4P10163 310 aaPredicted RBP3.78□□□□□ -1.8
CSMD3-203ENST00000343508 ODF1Q14990 250 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 LINC00173Q6ZV60 143 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 IGLL5B9A064 214 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 FXYD2P54710 66 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 NPC2P61916 151 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 C8orf86Q6ZUL3 223 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 TMEM86BQ8N661 226 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 C17orf77Q96MU5 243 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 EFNA4P52798 201 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 ZNF503Q96F45 646 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 IGHG4P01861 327 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 CRPP02741 224 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 FRMD6-AS1P0C7T7 363 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 MORN5Q5VZ52 161 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 MLST8Q9BVC4 326 aa3.78□□□□□ -1.8
CSMD3-203ENST00000343508 E9PLD3 99 aa3.78□□□□□ -1.81
CSMD3-203ENST00000343508 DIAPH2-AS1Q14236 149 aa3.78□□□□□ -1.81
CSMD3-203ENST00000343508 ANKRD29Q8N6D5 301 aa3.78□□□□□ -1.81
CSMD3-203ENST00000343508 TOMM6Q96B49 74 aa3.78□□□□□ -1.81
CSMD3-203ENST00000343508 ZNF415Q09FC8 603 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 ADARB2-AS1A8MUL3 147 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 UTF1Q5T230 341 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 FAM110DQ8TAY7 271 aaPredicted RBP3.77□□□□□ -1.81
CSMD3-203ENST00000343508 SVILO95425 2214 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 J3QQQ9 107 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 FREM1Q5H8C1 2179 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 I3L2K1 104 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 THBDP07204 575 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 WFDC2Q14508 124 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 STHQ8IWL8 128 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 IGFBPL1Q8WX77 278 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 MRPL53Q96EL3 112 aaKnown RBP3.77□□□□□ -1.81
CSMD3-203ENST00000343508 DOCK7Q96N67 2140 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 DYNAPQ8N1N2 210 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 TM2D2Q9BX73 214 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 C11orf68Q9H3H3 251 aaKnown RBP3.77□□□□□ -1.81
CSMD3-203ENST00000343508 TOMM7Q9P0U1 55 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 WI2-2373I1.2A0A1W2PRP0 233 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 HIST1H4AP62805 103 aaKnown RBP3.77□□□□□ -1.81
CSMD3-203ENST00000343508 IGFL4Q6B9Z1 124 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 SAA4P35542 130 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 IGFL3Q6UXB1 125 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 PATE2Q6UY27 113 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 PIFOQ8TCI5 191 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 RASL10AQ92737 203 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 LINC01587Q99440 93 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 UNC80Q8N2C7 3258 aa3.77□□□□□ -1.81
CSMD3-203ENST00000343508 LYNX1G3V0Z9 82 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 LYNX1P0DP58 116 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 IGLV2-8P01709 118 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 PRSS29PA6NIE9 313 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 GAGE2AQ6NT46 116 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 LOXP28300 417 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-203ENST00000343508 UBE2E1P51965 193 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 CFHR4Q92496 578 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 E7EUB6 86 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 CFC1BP0CG36 223 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 CFC1P0CG37 223 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 DTX1Q86Y01 620 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 ITLN2Q8WWU7 325 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-203ENST00000343508 DOCK10Q96BY6 2186 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 COL4A2P08572 1712 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 MALP21145 153 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 A0A0C4DFX4 3053 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 B5MCH6 92 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 MYO15AQ9UKN7 3530 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 RAI1Q7Z5J4 1906 aaPredicted RBP3.76□□□□□ -1.81
CSMD3-203ENST00000343508 IGHV3-11P01762 117 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 BRWD1-AS2P59051 145 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 Q6ZS92 163 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 RPL36AP83881 106 aaKnown RBP3.76□□□□□ -1.81
CSMD3-203ENST00000343508 NPBQ8NG41 125 aa3.76□□□□□ -1.81
CSMD3-203ENST00000343508 RPL36ALQ969Q0 106 aaKnown RBP3.76□□□□□ -1.81
CSMD3-203ENST00000343508 TRGV2A0A075B6R0 118 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms