RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 Q6ZQT7 251 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 TMEM61Q8N0U2 210 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BHQ93079 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 LINC00477Q96M19 166 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BNQ99877 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H2BMQ99879 126 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
FRMD4A-202ENST00000342409 TRGC1P0CF51 173 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 HIST1H1AQ02539 215 aaPredicted RBP12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 FABP9Q0Z7S8 132 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 DEFB114Q30KQ6 69 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 OR10J6PQ8NGY7 276 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 LENEPQ9Y5L5 61 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 PSMG4Q5JS54 123 aa12.82□□□□□ -0.36
FRMD4A-202ENST00000342409 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
FRMD4A-202ENST00000342409 FAM231BA6NCW3 169 aa12.81□□□□□ -0.36
FRMD4A-202ENST00000342409 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
FRMD4A-202ENST00000342409 TMEM136Q6ZRR5 245 aa12.81□□□□□ -0.36
FRMD4A-202ENST00000342409 PGLYRP4Q96LB8 373 aa12.81□□□□□ -0.36
FRMD4A-202ENST00000342409 ATRQ13535 2644 aa12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 FABP5P3A8MUU1 101 aa12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 RBPMS2Q6ZRY4 209 aaKnown RBP12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 VWFP04275 2813 aa12.8□□□□□ -0.36
FRMD4A-202ENST00000342409 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 KIR3DS1Q14943 382 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 CD300EQ496F6 205 aaPredicted RBP12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 APRG1Q8IVJ8 170 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 GNB1LQ9BYB4 327 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 TRAV2A0A0B4J234 112 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 A0A0J9YX75 114 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 CD33P20138 364 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 SNRPD3P62318 126 aaKnown RBP12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 NDUFA11Q86Y39 141 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 DYNLRB2Q8TF09 96 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 SIGLEC8Q9NYZ4 499 aa12.79□□□□□ -0.36
FRMD4A-202ENST00000342409 C5orf52A6NGY3 159 aa12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 SNURFLB1AK76 121 aa12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 CRISP2P16562 243 aa12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 LINC01559Q495D7 138 aa12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 MRPL18Q9H0U6 180 aaKnown RBP12.78□□□□□ -0.36
FRMD4A-202ENST00000342409 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.36
FRMD4A-202ENST00000342409 A0A1B0GUS0 222 aa12.77□□□□□ -0.36
FRMD4A-202ENST00000342409 PAFAH1B2P68402 229 aa12.77□□□□□ -0.36
FRMD4A-202ENST00000342409 TRBV7-9A0A0J9YWB2 115 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 ATP5L2Q7Z4Y8 100 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 ZNF256Q9Y2P7 627 aaPredicted RBP12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 J3KRW8 73 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 ORM1P02763 201 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 ARMS2P0C7Q2 107 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 IGLC6P0CF74 106 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 WDR73Q6P4I2 378 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 SAV1Q9H4B6 383 aaPredicted RBP12.76□□□□□ -0.37
FRMD4A-202ENST00000342409 KLLNB2CW77 178 aa12.75□□□□□ -0.37
FRMD4A-202ENST00000342409 NDUFA6P56556 154 aa12.75□□□□□ -0.37
FRMD4A-202ENST00000342409 PRR31Q5SQ13 230 aa12.75□□□□□ -0.37
FRMD4A-202ENST00000342409 GRIFINA4D1Z8 144 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 DEFB131AP59861 70 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 COX19Q49B96 90 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 TRAV25A0A0B4J276 109 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 MT-ND6P03923 174 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 CAMPP49913 170 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 RPS20P60866 119 aaKnown RBP12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 SLAQ13239 276 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 ZNF124Q15973 351 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 Q6AWC8 147 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 MAP6D1Q9H9H5 199 aa12.74□□□□□ -0.37
FRMD4A-202ENST00000342409 KNCNA6PVL3 124 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 A8MTW9 85 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 UBE2CO00762 179 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 HLA-DQA1P01909 254 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 S100A6P06703 90 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 CTRLP40313 264 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 RAB4BP61018 213 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 HBBP68871 147 aa12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 SSBP4Q9BWG4 385 aaPredicted RBP12.73□□□□□ -0.37
FRMD4A-202ENST00000342409 A0A1B0GUT8 65 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 XKRY2A2RUG3 117 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 GPX1P07203 203 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 RNASE4P34096 147 aaKnown RBP12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 GFI1BQ5VTD9 330 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 EBLN2Q6P2I7 272 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 MUC4Q99102 2169 aa12.72□□□□□ -0.37
FRMD4A-202ENST00000342409 IGKV3-20P01619 116 aa12.71□□□□□ -0.37
FRMD4A-202ENST00000342409 HOXA5P20719 270 aa12.71□□□□□ -0.37
FRMD4A-202ENST00000342409 LINC00482Q8N8I6 264 aa12.71□□□□□ -0.37
FRMD4A-202ENST00000342409 FER1L6-AS1Q8NA97 138 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms