RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZNF138P52744 262 aa14.1□□□□□ -0.15
SYNE2-201ENST00000341472 SOHLH1Q5JUK2 328 aa14.1□□□□□ -0.15
SYNE2-201ENST00000341472 EIF5AL1Q6IS14 154 aaKnown RBP14.1□□□□□ -0.15
SYNE2-201ENST00000341472 EIF4E3Q8N5X7 224 aaKnown RBP14.1□□□□□ -0.15
SYNE2-201ENST00000341472 ZNF503Q96F45 646 aa14.1□□□□□ -0.15
SYNE2-201ENST00000341472 M6PRP20645 277 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 ATP6V0CP27449 155 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 UBE2L3P68036 154 aaKnown RBP14.09□□□□□ -0.15
SYNE2-201ENST00000341472 SERF2P84101 59 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 ANXA2RQ3ZCQ2 193 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 Q6ZTI0 123 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 ZFAND2AQ8N6M9 145 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 BOLA1Q9Y3E2 137 aa14.09□□□□□ -0.15
SYNE2-201ENST00000341472 TRAV26-1A0A087WT03 109 aa14.08□□□□□ -0.16
SYNE2-201ENST00000341472 TRBV7-9A0A0J9YWB2 115 aa14.08□□□□□ -0.16
SYNE2-201ENST00000341472 SEC11BP0C7V7 166 aa14.08□□□□□ -0.16
SYNE2-201ENST00000341472 ACOT6Q3I5F7 207 aaPredicted RBP14.08□□□□□ -0.16
SYNE2-201ENST00000341472 KHDC3LQ587J8 217 aa14.08□□□□□ -0.16
SYNE2-201ENST00000341472 Q9H3A6 140 aa14.08□□□□□ -0.16
SYNE2-201ENST00000341472 TRGV2A0A075B6R0 118 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 A0A1W2PPV4 95 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 RGS13O14921 159 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 HOXA5P20719 270 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 C1orf134Q5TEV5 83 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 C11orf72Q8NBR9 251 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 OR2G3Q8NGZ4 309 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 RXFP4Q8TDU9 374 aa14.07□□□□□ -0.16
SYNE2-201ENST00000341472 A0A0J9YY99 117 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 RBAKDNA6NC62 111 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
SYNE2-201ENST00000341472 MBP02144 154 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 ZNRF2Q8NHG8 242 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 LINC00588Q9Y4M8 146 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 KLF12Q9Y4X4 402 aa14.06□□□□□ -0.16
SYNE2-201ENST00000341472 IGHV1OR15-1A0A075B7D0 117 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 TRGV1A0A0A0MS02 117 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 A0A1B0GVY2 172 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 PRR9Q5T870 116 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 Q8TAT8 98 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 TMPRSS5Q9H3S3 457 aa14.05□□□□□ -0.16
SYNE2-201ENST00000341472 PGPA6NDG6 321 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 DIRC3C9JPN6 131 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 H3BNG1 76 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 TCL1AP56279 114 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 Q6ZQT7 251 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 SSX7Q7RTT5 188 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 C18orf15Q96N68 181 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 SH3BGRL3Q9H299 93 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 TP53TG3Q9ULZ0 132 aa14.04□□□□□ -0.16
SYNE2-201ENST00000341472 HERC2O95714 4834 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 UMAD1C9J7I0 102 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 SPINK4O60575 86 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 FAM74A1Q5RGS3 127 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 IBA57Q5T440 356 aaKnown RBP14.03□□□□□ -0.16
SYNE2-201ENST00000341472 PQLC2Q6ZP29 291 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 OR10G4Q8NGN3 311 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 OR10G9Q8NGN4 311 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 OR10G7Q8NGN6 311 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
SYNE2-201ENST00000341472 NBDYA0A0U1RRE5 68 aa14.02□□□□□ -0.17
SYNE2-201ENST00000341472 RAB2AP61019 212 aa14.02□□□□□ -0.17
SYNE2-201ENST00000341472 AKR1C8PQ5T2L2 129 aa14.02□□□□□ -0.17
SYNE2-201ENST00000341472 LENEPQ9Y5L5 61 aa14.02□□□□□ -0.17
SYNE2-201ENST00000341472 DNAH11Q96DT5 4516 aa14.01□□□□□ -0.17
SYNE2-201ENST00000341472 RAB5CP51148 216 aa14.01□□□□□ -0.17
SYNE2-201ENST00000341472 TMED6Q8WW62 240 aa14.01□□□□□ -0.17
SYNE2-201ENST00000341472 HMGB3O15347 200 aaKnown RBP14□□□□□ -0.17
SYNE2-201ENST00000341472 ESRGQ1W209 222 aa14□□□□□ -0.17
SYNE2-201ENST00000341472 ARL6IP6Q8N6S5 226 aa14□□□□□ -0.17
SYNE2-201ENST00000341472 Q9H8V8 135 aa14□□□□□ -0.17
SYNE2-201ENST00000341472 DYNC1H1Q14204 4646 aaKnown RBP13.99□□□□□ -0.17
SYNE2-201ENST00000341472 MUC21Q5SSG8 566 aa13.99□□□□□ -0.17
SYNE2-201ENST00000341472 TEX261Q6UWH6 196 aa13.99□□□□□ -0.17
SYNE2-201ENST00000341472 DPPA3Q6W0C5 159 aa13.99□□□□□ -0.17
SYNE2-201ENST00000341472 VSIG2Q96IQ7 327 aa13.99□□□□□ -0.17
SYNE2-201ENST00000341472 RPH3ALQ9UNE2 315 aa13.99□□□□□ -0.17
SYNE2-201ENST00000341472 IFNA7P01567 189 aa13.98□□□□□ -0.17
SYNE2-201ENST00000341472 ZNF415Q09FC8 603 aa13.98□□□□□ -0.17
SYNE2-201ENST00000341472 ACTR3CQ9C0K3 210 aaPredicted RBP13.98□□□□□ -0.17
SYNE2-201ENST00000341472 MRPL16Q9NX20 251 aaKnown RBP13.98□□□□□ -0.17
SYNE2-201ENST00000341472 CDC34P49427 236 aaPredicted RBP13.97□□□□□ -0.17
SYNE2-201ENST00000341472 SULT1A2P50226 295 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 Q6AWC8 147 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 FAM159AQ6UWV7 190 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 ALKAL2Q6UX46 152 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 GOLT1AQ6ZVE7 132 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 C6orf223Q8N319 242 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 MDFICQ9P1T7 246 aa13.97□□□□□ -0.17
SYNE2-201ENST00000341472 KIAA1109Q2LD37 5005 aa13.96□□□□□ -0.17
SYNE2-201ENST00000341472 PAX4O43316 350 aa13.96□□□□□ -0.17
SYNE2-201ENST00000341472 IGHV3-53P01767 116 aa13.96□□□□□ -0.17
SYNE2-201ENST00000341472 SLAQ13239 276 aa13.96□□□□□ -0.17
SYNE2-201ENST00000341472 RAB24Q969Q5 203 aa13.96□□□□□ -0.17
SYNE2-201ENST00000341472 A0A096LPF7 62 aa13.95□□□□□ -0.18
SYNE2-201ENST00000341472 STAG3L2P0CL84 134 aa13.95□□□□□ -0.18
SYNE2-201ENST00000341472 STAG3L3P0CL85 134 aa13.95□□□□□ -0.18
SYNE2-201ENST00000341472 ARL14EPLP0DKL9 152 aa13.95□□□□□ -0.18
SYNE2-201ENST00000341472 PKD1P98161 4303 aa13.95□□□□□ -0.18
SYNE2-201ENST00000341472 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms