RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 HIVEP2P31629 2446 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 IGLV11-55A0A075B6I3 123 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
TRERF1-201ENST00000340840 ERCC8Q13216 396 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 OR10J6PQ8NGY7 276 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 C16orf54Q6UWD8 224 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 PHLDA3Q9Y5J5 127 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 PLNP26678 52 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 MINOS1Q5TGZ0 78 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 MINOS1-NBL1R4GNA1 71 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 U3KQK5 164 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 TLN2Q9Y4G6 2542 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 TNFRSF13BO14836 293 aaPredicted RBP7.37□□□□□ -1.23
TRERF1-201ENST00000340840 CLEC2AQ6UVW9 174 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 M0R381 172 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 ORMDL2Q53FV1 153 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 NPBQ8NG41 125 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 TRAV40A0A0B4J280 105 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 DTX2Q86UW9 622 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 OR11H6Q8NGC7 330 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 ZNF48Q96MX3 618 aaPredicted RBP7.37□□□□□ -1.23
TRERF1-201ENST00000340840 CCL19Q99731 98 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 MSRB1Q9NZV6 116 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 HIGD1BQ9P298 99 aa7.37□□□□□ -1.23
TRERF1-201ENST00000340840 ATP5G2Q06055 141 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 MRGPRG-AS1Q2M3A8 158 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 ZNF502Q8TBZ5 544 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 SIGMAR1Q99720 223 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 RAI1Q7Z5J4 1906 aaPredicted RBP7.36□□□□□ -1.23
TRERF1-201ENST00000340840 LY6HO94772 140 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 ADAMTSL5Q6ZMM2 481 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 FANCD2OSQ96PS1 177 aa7.36□□□□□ -1.23
TRERF1-201ENST00000340840 H3BVH4 76 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 FCN3O75636 299 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 PPP1R17O96001 155 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 IL17RELQ6ZVW7 336 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 DYNAPQ8N1N2 210 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 IGFBPL1Q8WX77 278 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 MRPL35Q9NZE8 188 aaKnown RBP7.35□□□□□ -1.23
TRERF1-201ENST00000340840 LOC107984156A0A0G2JMH3 177 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 F5H697 171 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 H7C1H1 209 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 ASIPP42127 132 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 Q71RC1 249 aaPredicted RBP7.35□□□□□ -1.23
TRERF1-201ENST00000340840 ARL17AQ8IVW1 177 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 RNF182Q8N6D2 247 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 NPFFR1Q9GZQ6 430 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 CHTOPQ9Y3Y2 248 aaKnown RBP7.35□□□□□ -1.23
TRERF1-201ENST00000340840 MTORP42345 2549 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 TRBV25-1A0A075B6N4 114 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 A0A1B0GWB2 263 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 IGLC6P0CF74 106 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 ODF1Q14990 250 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 CEND1Q8N111 149 aa7.35□□□□□ -1.23
TRERF1-201ENST00000340840 CTSGP08311 255 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 SCGB1C2P0DMR2 95 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 FGF6P10767 208 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 FXYD2P54710 66 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 TAL2Q16559 108 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 FAM110DQ8TAY7 271 aaPredicted RBP7.34□□□□□ -1.23
TRERF1-201ENST00000340840 MRPL16Q9NX20 251 aaKnown RBP7.34□□□□□ -1.23
TRERF1-201ENST00000340840 G3V4G9 280 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 SRSF2Q01130 221 aaKnown RBP7.34□□□□□ -1.23
TRERF1-201ENST00000340840 HIST2H2BCQ6DN03 193 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 K7ERJ3 54 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
TRERF1-201ENST00000340840 ZNF80P51504 273 aaPredicted RBP7.34□□□□□ -1.23
TRERF1-201ENST00000340840 JMJD8Q96S16 334 aa7.34□□□□□ -1.23
TRERF1-201ENST00000340840 RBAKDNA6NC62 111 aa7.34□□□□□ -1.24
TRERF1-201ENST00000340840 CELSR3Q9NYQ7 3312 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 IGKV3-7A0A075B6H7 116 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 TRAV21A0A0B4J279 112 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 TMEM238C9JI98 176 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 SMAGPQ0VAQ4 97 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 MRAP2Q96G30 205 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 BBC3Q96PG8 261 aaPredicted RBP7.33□□□□□ -1.24
TRERF1-201ENST00000340840 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 A0A096LNJ9 63 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 A0A1B0GV72 72 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 LY6LH3BQJ8 138 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
TRERF1-201ENST00000340840 PLA2G2AP14555 144 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 F8W1H4 67 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
TRERF1-201ENST00000340840 C9orf139Q6ZV77 190 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 CFHR4Q92496 578 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 AGPAT4-IT1Q9H0P7 198 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 GTSF1LQ9H1H1 148 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 MGAQ8IWI9 3026 aa7.33□□□□□ -1.24
TRERF1-201ENST00000340840 A0A087WX48 190 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 TEX48A0A1B0GUV7 120 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 F8VRH5 84 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 CIDEAO60543 219 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 TRGV3P03979 118 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 CYSLTR1Q9Y271 337 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 USP9YO00507 2555 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms