RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 NEGR1Q7Z3B1 354 aa8.68□□□□□ -1.02
SEMA4D-201ENST00000339861 LINC00574Q9H8X3 128 aa8.68□□□□□ -1.02
SEMA4D-201ENST00000339861 NXT2Q9NPJ8 142 aaKnown RBP8.68□□□□□ -1.02
SEMA4D-201ENST00000339861 K7ENP7 123 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 CD5LO43866 347 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 ASIPP42127 132 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 RAB9AP51151 201 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 Q8N976 141 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 SMAD7O15105 426 aaKnown RBP8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 COX8AP10176 69 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 PSMB2P49721 201 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 HSD52Q0P140 79 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 ZNF56Q15929 161 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 CD300EQ496F6 205 aaPredicted RBP8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 CLEC2AQ6UVW9 174 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 TTC9CQ8N5M4 171 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 ATP5LO75964 103 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 SLC50A1Q9BRV3 221 aa8.67□□□□□ -1.02
SEMA4D-201ENST00000339861 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 SEC11AP67812 179 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 FOXE3Q13461 319 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 PDE6HQ13956 83 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 SAMD5Q5TGI4 173 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 NAV2Q8IVL1 2488 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 TRAV41A0A0B4J266 112 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 TMEM8BA6NDV4 472 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 F6UB75 175 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 PRSS22Q9GZN4 317 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 ZNF418Q8TF45 676 aaPredicted RBP8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 M0R1W7 72 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 PPBPP02775 128 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 CTSGP08311 255 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 CD7P09564 240 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 ZNF80P51504 273 aaPredicted RBP8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 DTX2Q86UW9 622 aa8.66□□□□□ -1.02
SEMA4D-201ENST00000339861 H3BUX3 64 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 UCNP55089 124 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 OCIAD2Q56VL3 154 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 CFHR4Q92496 578 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 FANCD2OSQ96PS1 177 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 DUX5Q96PT3 197 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 IGHV3OR16-12A0A075B7B8 117 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 CRIP1P50238 77 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 OR4X2Q8NGF9 303 aa8.65□□□□□ -1.02
SEMA4D-201ENST00000339861 A0A087WWL8 130 aa8.65□□□□□ -1.03
SEMA4D-201ENST00000339861 PRSS2P07478 247 aa8.65□□□□□ -1.03
SEMA4D-201ENST00000339861 AGPAT4-IT1Q9H0P7 198 aa8.65□□□□□ -1.03
SEMA4D-201ENST00000339861 BEX4Q9NWD9 120 aaPredicted RBP8.65□□□□□ -1.03
SEMA4D-201ENST00000339861 MRPL16Q9NX20 251 aaKnown RBP8.65□□□□□ -1.03
SEMA4D-201ENST00000339861 LINC01548A6NM66 108 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 NPFFO15130 113 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 LAGE3Q14657 143 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 C8orf31Q8N9H6 132 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 MAPK1IP1LQ8NDC0 245 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 DCHS1Q96JQ0 3298 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 KALRNO60229 2985 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 IGHV7-81A0A0B4J1V7 117 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 TAX1BP3O14907 124 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 C8orf86Q6ZUL3 223 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 ATMQ13315 3056 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 INS-IGF2F8WCM5 200 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 K7EP13 123 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
SEMA4D-201ENST00000339861 RAI1Q7Z5J4 1906 aaPredicted RBP8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 IGLV11-55A0A075B6I3 123 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 MYCNOSP40205 109 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 HERVK_113P61574 105 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 CHAC1Q9BUX1 264 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 SCRT2Q9NQ03 307 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 PTPRBP23467 1997 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 TNRC6BQ9UPQ9 1833 aaKnown RBP8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 SAP30O75446 220 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 TRAV12-3A0A0B4J271 114 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 A0A1B0GWB2 263 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 OVOL3O00110 214 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 DEFB125Q8N687 156 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 CCL19Q99731 98 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 IGHV3-73A0A0B4J1V6 119 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 MINOS1Q5TGZ0 78 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 KIR2DL4Q99706 377 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 MINOS1-NBL1R4GNA1 71 aa8.63□□□□□ -1.03
SEMA4D-201ENST00000339861 GNLYP22749 145 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 ID1P41134 155 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 ZNF479Q96JC4 524 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 PIMREGQ9BSJ6 248 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 CHTOPQ9Y3Y2 248 aaKnown RBP8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 NPFFR1Q9GZQ6 430 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
SEMA4D-201ENST00000339861 IGLV2-11P01706 119 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms