RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 TCEAL7Q9BRU2 100 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 SACSQ9NZJ4 4579 aa9.21□□□□□ -0.93
SRSF3-201ENST00000339436 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 CXorf65A6NEN9 183 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 FBLL1A6NHQ2 334 aaKnown RBP9.21□□□□□ -0.94
SRSF3-201ENST00000339436 PAGE4O60829 102 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 HTN1P15515 57 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 ATP5G3P48201 142 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 RNASE8Q8TDE3 154 aaKnown RBP9.21□□□□□ -0.94
SRSF3-201ENST00000339436 TMEM263Q8WUH6 116 aaKnown RBP9.21□□□□□ -0.94
SRSF3-201ENST00000339436 HIST1H2BAQ96A08 127 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 TVP23CQ96ET8 276 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 C16orf74Q96GX8 76 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 SGK494Q96LW2 274 aa9.21□□□□□ -0.94
SRSF3-201ENST00000339436 TEX46H3BTG2 121 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 AZU1P20160 251 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 CCL20P78556 96 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 FLI1Q01543 452 aaPredicted RBP9.2□□□□□ -0.94
SRSF3-201ENST00000339436 Q6AWC8 147 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 TREM1Q9NP99 234 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 MANBALQ9NQG1 85 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 DKK2Q9UBU2 259 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 PSG8Q9UQ74 426 aa9.2□□□□□ -0.94
SRSF3-201ENST00000339436 TEX48A0A1B0GUV7 120 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 F6UZH7 168 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 FAM222AQ5U5X8 452 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 Q6ZQT7 251 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 ZNF493Q6ZR52 646 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 Q86TA4 180 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 LINC00467Q9BRT7 94 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 GNG13Q9P2W3 67 aa9.19□□□□□ -0.94
SRSF3-201ENST00000339436 MUC4Q99102 2169 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 LYSTQ99698 3801 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 DNAH1Q9P2D7 4330 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 TRAV34A0A0B4J273 112 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 NUPR2A6NF83 97 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 SPART-AS1P0CW21 52 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 PRNTQ86SH4 94 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 LINC00479Q96M42 142 aa9.18□□□□□ -0.94
SRSF3-201ENST00000339436 C11orf94C9JXX5 98 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 RGS13O14921 159 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 C12orf74Q32Q52 190 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 Q6ZTC4 211 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 EIF4E3Q8N5X7 224 aaKnown RBP9.17□□□□□ -0.94
SRSF3-201ENST00000339436 PHLDA1Q8WV24 401 aaPredicted RBP9.17□□□□□ -0.94
SRSF3-201ENST00000339436 C8orf49Q96NF6 230 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 ALMS1Q8TCU4 4167 aa9.17□□□□□ -0.94
SRSF3-201ENST00000339436 IGHV1OR15-1A0A075B7D0 117 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 SCO2A0A1W2PP80 73 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 LYRM9A8MSI8 78 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 AKR1C3P42330 323 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 C2CD4CQ8TF44 421 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 FMC1Q96HJ9 113 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 KLF12Q9Y4X4 402 aa9.16□□□□□ -0.94
SRSF3-201ENST00000339436 TRAV21A0A0B4J279 112 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 CBY3A6NI87 242 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 BCL2P10415 239 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 UBE2G1P62253 170 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 SAPCD1Q5SSQ6 148 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 CEMP1Q6PRD7 247 aaPredicted RBP9.15□□□□□ -0.94
SRSF3-201ENST00000339436 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
SRSF3-201ENST00000339436 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.94
SRSF3-201ENST00000339436 TRBV6-1A0A0K0K1D8 114 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 GCGP01275 180 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 IFNA1P01562 189 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 ZNF80P51504 273 aaPredicted RBP9.15□□□□□ -0.95
SRSF3-201ENST00000339436 BLOC1S1P78537 153 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 MEF2BQ02080 365 aaPredicted RBP9.15□□□□□ -0.95
SRSF3-201ENST00000339436 TMEM183BQ1AE95 376 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 SMUG1Q53HV7 270 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 C11orf52Q96A22 123 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 TXNDC17Q9BRA2 123 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 NOP10Q9NPE3 64 aaKnown RBP9.15□□□□□ -0.95
SRSF3-201ENST00000339436 NAGKQ9UJ70 344 aa9.15□□□□□ -0.95
SRSF3-201ENST00000339436 NACAE9PAV3 2078 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 TRAV10A0A0B4J240 114 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 SNURFLB1AK76 121 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 LTAP01374 205 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 PFN1P07737 140 aaKnown RBP9.14□□□□□ -0.95
SRSF3-201ENST00000339436 DAD1P61803 113 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 TDRG1Q3Y452 100 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 IBA57Q5T440 356 aaKnown RBP9.14□□□□□ -0.95
SRSF3-201ENST00000339436 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
SRSF3-201ENST00000339436 TAGLN2P37802 199 aaKnown RBP9.13□□□□□ -0.95
SRSF3-201ENST00000339436 TCL1AP56279 114 aa9.13□□□□□ -0.95
SRSF3-201ENST00000339436 DAZ2Q13117 558 aaKnown RBP9.13□□□□□ -0.95
SRSF3-201ENST00000339436 FAM159AQ6UWV7 190 aa9.13□□□□□ -0.95
SRSF3-201ENST00000339436 COX8CQ7Z4L0 72 aa9.13□□□□□ -0.95
SRSF3-201ENST00000339436 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
SRSF3-201ENST00000339436 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
SRSF3-201ENST00000339436 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
SRSF3-201ENST00000339436 TRGV11A0A075B6L2 103 aa9.12□□□□□ -0.95
SRSF3-201ENST00000339436 S100A9P06702 114 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms