RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 ARPC5LQ9BPX5 153 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 PAXXQ9BUH6 204 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 KRTAP1-5Q9BYS1 174 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 WFDC1Q9HC57 220 aa13.45□□□□□ -0.26
ITGA4-202ENST00000339307 MRPS16Q9Y3D3 137 aaKnown RBP13.45□□□□□ -0.26
ITGA4-202ENST00000339307 BORCS7-ASMTA0A0B4J1R7 106 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 C1QBP02746 253 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 ANXA2RQ3ZCQ2 193 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 KCNRGQ8N5I3 272 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 OR11H4Q8NGC9 324 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 VSIG2Q96IQ7 327 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 FAM19A4Q96LR4 140 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 UPK3BQ9BT76 320 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 Q9H3A6 140 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 TP53TG3Q9ULZ0 132 aa13.44□□□□□ -0.26
ITGA4-202ENST00000339307 A0A1B0GVG6 124 aa13.43□□□□□ -0.26
ITGA4-202ENST00000339307 OR7C2O60412 319 aa13.43□□□□□ -0.26
ITGA4-202ENST00000339307 FAM167A-AS1Q96KT0 104 aa13.43□□□□□ -0.26
ITGA4-202ENST00000339307 HYLS1Q96M11 299 aa13.43□□□□□ -0.26
ITGA4-202ENST00000339307 MRPL16Q9NX20 251 aaKnown RBP13.43□□□□□ -0.26
ITGA4-202ENST00000339307 IGHV1OR15-1A0A075B7D0 117 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 A0A096LPF7 62 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 PAX4O43316 350 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 CRISP2P16562 243 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 CSN1S1P47710 185 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 TCL1AP56279 114 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 Q6ZQT7 251 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 Q8TAT8 98 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 PSMG3Q9BT73 122 aaPredicted RBP13.42□□□□□ -0.26
ITGA4-202ENST00000339307 KRTAP4-5Q9BYR2 181 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 ZNF492Q9P255 531 aa13.42□□□□□ -0.26
ITGA4-202ENST00000339307 SPINK4O60575 86 aa13.41□□□□□ -0.26
ITGA4-202ENST00000339307 RANP62826 216 aaKnown RBP13.41□□□□□ -0.26
ITGA4-202ENST00000339307 PRR9Q5T870 116 aa13.41□□□□□ -0.26
ITGA4-202ENST00000339307 ZFAND2AQ8N6M9 145 aa13.41□□□□□ -0.26
ITGA4-202ENST00000339307 MAPKAPK5-AS1Q8N8E1 139 aa13.41□□□□□ -0.26
ITGA4-202ENST00000339307 MRPL32Q9BYC8 188 aaKnown RBP13.41□□□□□ -0.26
ITGA4-202ENST00000339307 RYR1P21817 5038 aa13.41□□□□□ -0.26
ITGA4-202ENST00000339307 A0A1W2PPQ1 181 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 NMBP08949 121 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 ZNF138P52744 262 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 SERF2P84101 59 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 PHYHIPLQ96FC7 376 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 ICOSQ9Y6W8 199 aa13.4□□□□□ -0.26
ITGA4-202ENST00000339307 CDK2AP2O75956 126 aa13.39□□□□□ -0.27
ITGA4-202ENST00000339307 MUC21Q5SSG8 566 aa13.39□□□□□ -0.27
ITGA4-202ENST00000339307 IBA57Q5T440 356 aaKnown RBP13.39□□□□□ -0.27
ITGA4-202ENST00000339307 OR2G3Q8NGZ4 309 aa13.39□□□□□ -0.27
ITGA4-202ENST00000339307 C18orf15Q96N68 181 aa13.39□□□□□ -0.27
ITGA4-202ENST00000339307 EIF5AP63241 154 aaKnown RBP13.39□□□□□ -0.27
ITGA4-202ENST00000339307 ZNF415Q09FC8 603 aa13.39□□□□□ -0.27
ITGA4-202ENST00000339307 RPL7L1Q6DKI1 246 aaKnown RBP13.39□□□□□ -0.27
ITGA4-202ENST00000339307 KANTRA0A1W2PQU2 76 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 SIVA1O15304 175 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 MBP02144 154 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 UBE2L3P68036 154 aaKnown RBP13.38□□□□□ -0.27
ITGA4-202ENST00000339307 ACOT6Q3I5F7 207 aaPredicted RBP13.38□□□□□ -0.27
ITGA4-202ENST00000339307 FFAR4Q5NUL3 377 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 C8orf49Q96NF6 230 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 CYTL1Q9NRR1 136 aa13.38□□□□□ -0.27
ITGA4-202ENST00000339307 BCL2L11O43521 198 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 ATP6V0CP27449 155 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 LINC00315P59091 139 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 HSD17B11Q8NBQ5 300 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 PRO0255Q9UI72 69 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 HHLA3Q9XRX5 114 aa13.37□□□□□ -0.27
ITGA4-202ENST00000339307 ABCA13Q86UQ4 5058 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 TRGV4A0A0C4DH28 118 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 NXPH4O95158 308 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 ZFP69Q49AA0 526 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 TMUB2Q71RG4 321 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 RPH3ALQ9UNE2 315 aa13.36□□□□□ -0.27
ITGA4-202ENST00000339307 PFDN1O60925 122 aa13.35□□□□□ -0.27
ITGA4-202ENST00000339307 KRTAP10-2P60368 255 aa13.35□□□□□ -0.27
ITGA4-202ENST00000339307 SLAQ13239 276 aa13.35□□□□□ -0.27
ITGA4-202ENST00000339307 NAGKQ9UJ70 344 aa13.35□□□□□ -0.27
ITGA4-202ENST00000339307 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
ITGA4-202ENST00000339307 TAS2R45P59539 299 aa13.34□□□□□ -0.27
ITGA4-202ENST00000339307 LGALSLQ3ZCW2 172 aaPredicted RBP13.34□□□□□ -0.27
ITGA4-202ENST00000339307 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
ITGA4-202ENST00000339307 LYPD1Q8N2G4 141 aa13.34□□□□□ -0.27
ITGA4-202ENST00000339307 MDFICQ9P1T7 246 aa13.34□□□□□ -0.27
ITGA4-202ENST00000339307 RBAKDNA6NC62 111 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 BTF3P20290 206 aaKnown RBP13.33□□□□□ -0.28
ITGA4-202ENST00000339307 CRYBA4P53673 196 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 FHL2Q14192 279 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 MRPL23Q16540 153 aaKnown RBP13.33□□□□□ -0.28
ITGA4-202ENST00000339307 TMEM183BQ1AE95 376 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 FAM159AQ6UWV7 190 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 TMEM183AQ8IXX5 376 aa13.33□□□□□ -0.28
ITGA4-202ENST00000339307 TRBV7-9A0A0J9YWB2 115 aa13.32□□□□□ -0.28
ITGA4-202ENST00000339307 DIRC3C9JPN6 131 aa13.32□□□□□ -0.28
ITGA4-202ENST00000339307 SFTA3P0C7M3 94 aa13.32□□□□□ -0.28
ITGA4-202ENST00000339307 LYPD5Q6UWN5 251 aa13.32□□□□□ -0.28
ITGA4-202ENST00000339307 CMTM2Q8TAZ6 248 aa13.32□□□□□ -0.28
ITGA4-202ENST00000339307 ZNF471Q9BX82 626 aaPredicted RBP13.32□□□□□ -0.28
ITGA4-202ENST00000339307 A0A1W2PPV4 95 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms