RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 VGLL1Q99990 258 aa10.92□□□□□ -0.66
RTN4-202ENST00000337526 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 S100A7L2Q5SY68 101 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 JPT2Q9H910 190 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 C6orf226Q5I0X4 101 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 MSMBP08118 114 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 MAJINQ3KP22 176 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 PRO3102Q9H379 93 aa10.91□□□□□ -0.66
RTN4-202ENST00000337526 TRAV8-3A0A0A6YYJ7 113 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 LTAP01374 205 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 C11orf68Q9H3H3 251 aaKnown RBP10.9□□□□□ -0.66
RTN4-202ENST00000337526 IGHV1-69DA0A0B4J2H0 117 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 IGHV1-69P01742 117 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 PMVKQ15126 192 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 MSRB2Q9Y3D2 182 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 ARHGAP21Q5T5U3 1957 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.66
RTN4-202ENST00000337526 ZNF625Q96I27 306 aaPredicted RBP10.9□□□□□ -0.67
RTN4-202ENST00000337526 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
RTN4-202ENST00000337526 KRTAP27-1Q3LI81 207 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 C2CD3Q4AC94 2353 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 SMIM2Q9BVW6 85 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 GAGE1Q13065 139 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 CTSZQ9UBR2 303 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 F8VRH5 84 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 K7EP13 123 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 SPINK8P0C7L1 97 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 WIPF2Q8TF74 440 aaPredicted RBP10.89□□□□□ -0.67
RTN4-202ENST00000337526 FAM120AOSQ5T036 256 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 ZNF747Q9BV97 191 aa10.89□□□□□ -0.67
RTN4-202ENST00000337526 NUPR1O60356 82 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 C1orf122Q6ZSJ8 110 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 PLXNB3Q9ULL4 1909 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 C1QTNF4Q9BXJ3 329 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 GOLGB1Q14789 3259 aaKnown RBP10.88□□□□□ -0.67
RTN4-202ENST00000337526 C22orf46C9J442 243 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 NDUFA4O00483 81 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 LINC01356Q8N9X3 169 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 KIR2DL5BA0A0G2JN68 375 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 KIR2DL5BA0A0G2JPC4 375 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 RHODO00212 210 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 NEGR1Q7Z3B1 354 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 KIR2DL5AQ8N109 375 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 KLK9Q9UKQ9 250 aa10.88□□□□□ -0.67
RTN4-202ENST00000337526 NDUFS7O75251 213 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 LEPROTO15243 131 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 C8orf31Q8N9H6 132 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 XCL2Q9UBD3 114 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
RTN4-202ENST00000337526 TRBV20-1A0A075B6N2 111 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 LHBP01229 141 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 LGALS1P09382 135 aaKnown RBP10.86□□□□□ -0.67
RTN4-202ENST00000337526 HLA-DMBP28068 263 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 IGHV1OR15-1A0A075B7D0 117 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 FRMPD3Q5JV73 1810 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 KLF5Q13887 457 aaPredicted RBP10.86□□□□□ -0.67
RTN4-202ENST00000337526 UNQ6494/PRO21346Q6UXR6 183 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 PLXNB1O43157 2135 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 TANC1Q9C0D5 1861 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 KIAA1671Q9BY89 1806 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 EGR2P11161 476 aaPredicted RBP10.86□□□□□ -0.67
RTN4-202ENST00000337526 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 HLA-DRB4X5D2U9 266 aa10.86□□□□□ -0.67
RTN4-202ENST00000337526 I3L3M4 83 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 GATA3P23771 443 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 AGPAT4-IT1Q9H0P7 198 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 NACAE9PAV3 2078 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 WT1P19544 449 aaPredicted RBP10.85□□□□□ -0.67
RTN4-202ENST00000337526 NBL1P41271 181 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 CDKN1BP46527 198 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 MORN5Q5VZ52 161 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 K7EP34 96 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 DEFB130BP0DP73 79 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 DEFB130AP0DP74 79 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 TDRG1Q3Y452 100 aa10.85□□□□□ -0.67
RTN4-202ENST00000337526 Q6ZVH6 145 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 A0A1W2PPM0 123 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 PATE2Q6UY27 113 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 DYNAPQ8N1N2 210 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 MAPK1IP1LQ8NDC0 245 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 DKK4Q9UBT3 224 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 IGHV3-16A0A0C4DH30 117 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 F8W1H4 67 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
RTN4-202ENST00000337526 HIST1H4AP62805 103 aaKnown RBP10.84□□□□□ -0.67
RTN4-202ENST00000337526 TSSC4Q9Y5U2 329 aaPredicted RBP10.83□□□□□ -0.68
RTN4-202ENST00000337526 TECTAO75443 2155 aa10.83□□□□□ -0.68
RTN4-202ENST00000337526 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.68
RTN4-202ENST00000337526 C20orf78Q9BR46 151 aa10.83□□□□□ -0.68
RTN4-202ENST00000337526 LAMTOR3Q9UHA4 124 aa10.83□□□□□ -0.68
RTN4-202ENST00000337526 H3BMG7 143 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 PRSS33Q8NF86 280 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 SIVA1O15304 175 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms